result

Gene information

Detail information of AfisC4G02200

Location

Gene	Chr	Start	End	Strand
AfisC4G02200	chr4	410332267	410334211	+

Sequences

CDS

>AfisC4G02200
ATGGATCACCAACCTATCTCCACGGACTCCACCTTCTTTCTGTTCGCACTGCCGACCCTCATCTCCTCTCAGCTCTTCACACCTACCCAACTCTTCTTTCTCATCGCCGTCTCCCTTCTCTCCGTCACGCTCCTCACCTGGGCCCTCTCCTCAGCCGGCCCTGCATGGCCGCACAACCGTTCCCGCCTCGGCCCAACTCCCATTCCCGGCGTCCGTGGCCTTCCACTCCTCGGCTCGCTCCTTTCCCTCACCTGCTCCCTCCCTCATCGCACCCTCGCTCGCCTCTCTCAGGCAGCCCGTGCCCATCAACTCCTCGCCTTCTCCGTTGGCTCCACCCCGACCGTAGTTTCGACCGACGTATCAACATCCAAAGAAATTCTGACACATCCCAACTTTTCAGACCGGCCCATCAAGTTCTCTGCCCGTGAGCTCATGTTCCACCGGGCCATGGGCTTTGCCCCTAACGGTGTATACTGGCGTCTTCTACGCCGCATAGCTTCATCTCACCTGTTCGCCCCTAGAAGGATTGCGGCCCATGAGCCCTCCCGCCAGCTCGATGCGGAACTAATGCTGCATAGGATCACCACCGAAATGTCCCTTTCGGGCCGAGTCATGGTCCGGCCCCATCTGCAAACCGCGGCGCTGAACAACGTGATGGGAAGCGTGTTCGGTATCAGGTACGAAGACGTGGCGGATGCCGATTCGTTAAAGGAGATGGTGCGGGAAGGGTTCGAGTTGCTTGGCGCATTCAACTGGTGCGATCACTTGCCGTGGCTTTCAGGATTCTTCGATCCAGGGAATGTGAAGAAGAGGTGCGCTGTCCTTGTTCCACGTGTCAGGCAGTTCGTGCAGGGAATCATCGACGAGCATAGGGCTGGAAGGATCAAAGGCCGTTACATTCAAGATGGTAATGCGGATTTCGTAGATGTGTTGTTGAATTTGGAAGGTGAAGAGAAACTTGGCGATGACGACATGATTGCTGTGTTATGGGAAATGATATTTAGAGGAACAGACACAACGGCGCTACTGACGGAGTGGGCGTTGGCAGAGCTAATTATAAATCCAGACGTGCAGGCCAAACTGTACAACGAAATAGCTACTAACGTCGGTCCCGGAATTGAGGTTACAGATGCTGACGTTGCAAGGATGCCTTACTTGCAGGCTGTGATAAAGGAAACACTGAGAGCCCACCCGCCCGGCCCGCTTCTGTCATGGGCGAGGCTGTCAACCGACGACGTGAAGCTCAGCAATGGGATGGTGGTGCCAGCTGGGACGACGGCGATGGTGAACATGTGGGGAATTACTCACGACGAGAAGGTGTGGGCAAGGCCGGATGTGTTCGACCCGGAAAGGTTCATAGGTGCAGACGTGGACGTACGTGGGTGCGATTTGAGGTTGGCGCCCTTTGGTGCAGGTAGGAGAGTTTGTCCTGGGAAGAATTTGGGGCTGGTGACTGTTGGGCTGTGGATAGCCAAATTGGTAAGGAAGTTCAAGTGGGAAGAGACTGCGGAAGGTGTTGATCTGAGTGAGTTGCTTAAGCTATCTTGTGAGATGAAGAATCCTCTTGTTGCTAGAACCTGTGTCAGATATTGA

Protein

Gene

>AfisC4G02200
CCTTTCACTCATCACTCCCCATAAAAAACTTAACTAAACCGAAAATATGGATCACCAACCTATCTCCACGGACTCCACCTTCTTTCTGTTCGCACTGCCGACCCTCATCTCCTCTCAGCTCTTCACACCTACCCAACTCTTCTTTCTCATCGCCGTCTCCCTTCTCTCCGTCACGCTCCTCACCTGGGCCCTCTCCTCAGCCGGCCCTGCATGGCCGCACAACCGTTCCCGCCTCGGCCCAACTCCCATTCCCGGCGTCCGTGGCCTTCCACTCCTCGGCTCGCTCCTTTCCCTCACCTGCTCCCTCCCTCATCGCACCCTCGCTCGCCTCTCTCAGGCAGCCCGTGCCCATCAACTCCTCGCCTTCTCCGTTGGCTCCACCCCGACCGTAGTTTCGACCGACGTATCAACATCCAAAGAAATTCTGACACATCCCAACTTTTCAGACCGGCCCATCAAGTTCTCTGCCCGTGAGCTCATGTTCCACCGGGCCATGGGCTTTGCCCCTAACGGTGTATACTGGCGTCTTCTACGCCGCATAGCTTCATCTCACCTGTTCGCCCCTAGAAGGATTGCGGCCCATGAGCCCTCCCGCCAGCTCGATGCGGAACTAATGCTGCATAGGATCACCACCGAAATGTCCCTTTCGGGCCGAGTCATGGTCCGGCCCCATCTGCAAACCGCGGCGCTGAACAACGTGATGGGAAGCGTGTTCGGTATCAGGTACGAAGACGTGGCGGATGCCGATTCGTTAAAGGAGATGGTGCGGGAAGGGTTCGAGTTGCTTGGCGCATTCAACTGGTGCGATCACTTGCCGTGGCTTTCAGGATTCTTCGATCCAGGGAATGTGAAGAAGAGGTGCGCTGTCCTTGTTCCACGTGTCAGGCAGTTCGTGCAGGGAATCATCGACGAGCATAGGGCTGGAAGGATCAAAGGCCGTTACATTCAAGATGGTAATGCGGATTTCGTAGATGTGTTGTTGAATTTGGAAGGTGAAGAGAAACTTGGCGATGACGACATGATTGCTGTGTTATGGGTAATTTTCATTTACCACCTTTTCTTGTAACGTAATTATTGTTGTAGTTTTAGTACTAATTAACTAGTTGAGTTGATGCAGGAAATGATATTTAGAGGAACAGACACAACGGCGCTACTGACGGAGTGGGCGTTGGCAGAGCTAATTATAAATCCAGACGTGCAGGCCAAACTGTACAACGAAATAGCTACTAACGTCGGTCCCGGAATTGAGGTTACAGATGCTGACGTTGCAAGGATGCCTTACTTGCAGGCTGTGATAAAGGAAACACTGAGAGCCCACCCGCCCGGCCCGCTTCTGTCATGGGCGAGGCTGTCAACCGACGACGTGAAGCTCAGCAATGGGATGGTGGTGCCAGCTGGGACGACGGCGATGGTGAACATGTGGGGAATTACTCACGACGAGAAGGTGTGGGCAAGGCCGGATGTGTTCGACCCGGAAAGGTTCATAGGTGCAGACGTGGACGTACGTGGGTGCGATTTGAGGTTGGCGCCCTTTGGTGCAGGTAGGAGAGTTTGTCCTGGGAAGAATTTGGGGCTGGTGACTGTTGGGCTGTGGATAGCCAAATTGGTAAGGAAGTTCAAGTGGGAAGAGACTGCGGAAGGTGTTGATCTGAGTGAGTTGCTTAAGCTATCTTGTGAGATGAAGAATCCTCTTGTTGCTAGAACCTGTGTCAGATATTGAAGGTGGTTTGTTAATTAAGTTCGATATTATAAGGTGGTATAGTCTGCTAATTATGGTTTTTAGTAGGGGTAAACGCTAGTGTAATATGCATGTGGGATTTGGAGCTTCATGTTTTGAAAGTATGTAAATGAAGTTTCTTGAATGTACTATGTGAATTCTATATTTTATGCAATGGGTGTTGTTTTAGACTTTTAGTAATGTATGTGTTGCATGGTTTGTGGCTTT

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3326397.1	1.8e-193	cytochrome P450 78A11
Swissprot	Q7Y1V5.2	2.4e-182	Protein PLASTOCHRON1
trEMBL	A0A833V6K5	1.3e-193	Cytochrome P450 78A11

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G09970.1	59.01	3e-180	628	CYP78A7	cytochrome P450, family 78, subfamily A, polypeptide 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02200	AT5G09970.1	527	203	7	7	524	8	530	59.01	3e-180	628
AfisC4G02200	AT1G13710.1	500	229	9	36	529	23	512	51.00	7e-135	478
AfisC4G02200	AT2G46660.1	528	244	11	13	525	9	524	48.67	9e-135	477

Ortholog group

Species	Genes
Allium cepa	g359049.t1
Allium fistulosum	AfisC4G02200
Allium sativum	Asa0G00209.1; Asa0G05879.1; Asa4G02264.1; Asa4G02341.1; Asa5G02980.1; Asa5G02981.1; Asa5G02984.1
Arabidopsis thaliana	AT5G09970.1
Oryza sativa	LOC_Os10g26340.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	69	502	271.8	8.9e-81

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005783	C	endoplasmic reticulum
GO:0046872	F	metal ion binding
GO:0008284	P	positive regulation of cell proliferation
GO:0009699	P	phenylpropanoid biosynthetic process
GO:0010075	P	regulation of meristem growth
GO:0010229	P	inflorescence development
GO:0010338	P	leaf formation
GO:0019825	F	oxygen binding
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0040009	P	regulation of growth rate
GO:0044425	C	membrane part
GO:0046622	P	positive regulation of organ growth
GO:0048316	P	seed development
GO:0048437	P	floral organ development
GO:0048504	P	regulation of timing of organ formation
GO:0050896	P	response to stimulus
GO:0051781	P	positive regulation of cell division

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20619	CYP78A; cytochrome P450 family 78 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network