result

Gene information

Detail information of AfisC4G02312

Location

Gene	Chr	Start	End	Strand
AfisC4G02312	chr4	438700620	438703240	-

Sequences

CDS

>AfisC4G02312
ATGGGAAATTTTTGCTTTGTTCCTTTTAAATCTCGAAGCCCTACAATCATTACAAAATCGTCTCTAGGCAGCAATACTGAAACAAATACAAGTATAACAAGCAAGTCATCAAGCATTAACGACACAGAAAGTATCAATGGCCAAATTGTTGAAGTTCCAACTCTTAGAATTTACACATTCTATGAATTGAGGATGGCAACGAGAAACTTTAAACTCGATCCAGTTATAGAAGGAGGATTCAGCTTGGTTTACAAAGGATGGGTAGATAGGAGTACTTTGAATCCTACTGGAATACCAGGACAAGGAATTGTTGTTGCAGTTGAAAAACTTAACCCTGAGAGCATTCTAGGACTAAAAGAGCTGCAGGCTGAAGTGAACGCTGTAGGAAGTTTATCGCATCCAAACCTAGTCAAACTCTTAGGATATTGCATAGAAGACAAAGAAACTCTTCTTGTTTACGAATACATGGCAAAAGGAAGCTTAGAGAATCACTTATTTAGAAAAGCAACTGGCCCTGATCCACTGTCATGGAATACAAGGTTGAAAATATTGATAGGAGCAGCCCGAGGGCTAGCATTCTTGCATTATTCGAAGCAGCAAGTTATTTATAGAGACTTTAAACCTTCTAATATACTTCTTGATTCGAATTACAATCCAAAACTATCTGATTTTGGAATTACAAAGAATAAACCAAATGGAGAACACCATCCCGTGGCTCCTCAGATTATGCAAACTCATGGATATGCTGCTCCTGAATATATTGCTACAGGTCATTTGTTCATGAAAAGTGATGTATATGGGTTTGGTGTAGTACTGCTAGAAATGCTATCCGGTCTAAGAACAATCGATCACAACCGTCCAAACCAAAAGCGGAACTTGGTATACTGGGCAAAACCATACTTGCTACATCGAAGAAATCTAATCAATTTAGTGATGGATAAGAGTTTGAGAGGACAATATCATCCGAAGGCTGCACTTCAAGCAGCCCAACTCACCCTGCGTTGCTTAGCTACTAATCCAATAGAAAGACCGCATATGGAGGAAGTAGCCAAAATTTTACAAAAGGTTGAAGCAGTTGCGTTGAGTAGTTCGAAGGGTTCAAAATATTGTTAG

Protein

Gene

>AfisC4G02312
TCGTGTTAGTATAAAACCAAGGCTAACCAAAAATTCATTGACTAATCTCGTTCCTTAGCATGATCTGTTCCTCTAAGAGCAAGGCATAGAAGCCCTTTCAAGAAGGGAAAAAAGAACAAAGAAAAAAGAACAAACTAAAATCTAAACATGGGAAATTTTTGCTTTGTTCCTTTTAAATCTCGAAGCCCTACAATCATTACAAAATCGTCTCTAGGTAACTTACATATTTTTGTTTTTCTTGCTATTTATTTTATGGCCTAGTTCTCTTTGATTTCATGACATGCTATGATATTATATCAATTTCTTTGTTGATGTATTTACTACGTACCATTCTATTCCTCTTAAAATCAGCAGGCAGCAATACTGAAACAAATACAAGTATAACAAGCAAGTCATCAAGCATTAACGACACAGAAAGTATCAATGGCCAAATTGTTGAAGTTCCAACTCTTAGAATTTACACATTCTATGAATTGAGGATGGCAACGAGAAACTTTAAACTCGATCCAGTTATAGAAGGAGGATTCAGCTTGGTTTACAAAGGATGGGTAGATAGGAGTACTTTGAATCCTACTGGAATACCAGGACAAGGAATTGTTGTTGCAGTTGAAAAACTTAACCCTGAGAGCATTCTAGGACTAAAAGAGCTGCAGGTAAAACGAAAGCAATTGTAATAGTAATAAAAAACTTAAGTGGTCAAAATAAGCTAGCATATTTTGGCGAGGTTAGTAAAATTTATATTTATGGATTGTAACAATCTATATAGATTAAAGATGACAATGATCATTAATCTAGTGGTAAGGCAGCTTCTATAAATTGCTAAAGATATTGGATTTGAAAGTCTATATGCACCGTCAGTTTTTGTTAAGATTTAAATGAAAAATCAAGAGATTACATATTAGCAGCTGAAACATTTGATGATACATGGGCAGTAACAAAAATTCCACCAAAATGTTCTAGAAAATAATGTTTGCTTGACGGTATGTTTAATATATTCATGACCCATCTATTGTATTCGTACTTGTTGACTGAAAAAAAAGAAGAAGCCAACTCTTGTATGTACGGAAAATGTCCAAACTAGTTGAAATGCTGTCTAACATATTGAATTGATAAAATCGTTATTACTTTGCATCACCCTGTCAATTGATTCATTTATTGTAATGTGTATAGGCTGAAGTGAACGCTGTAGGAAGTTTATCGCATCCAAACCTAGTCAAACTCTTAGGATATTGCATAGAAGACAAAGAAACTCTTCTTGTTTACGAATACATGGCAAAAGGAAGCTTAGAGAATCACTTATTTAGAAGTGAGTTTTTGCATTTCTTACATATTATATATTAAGAAATGTGATTATGATTTATAACACAGTATTAATTAGGCATAGCTATATATTCTTGTACCCTATTTGCTTTGAAATTGGATTATAACATAGATTTCTTATTGTCATCTATTTCTATCGCAATGTGTGTAACAAGTATAATGTGCTTGTACTTTTATTGAACAGAAGCAACTGGCCCTGATCCACTGTCATGGAATACAAGGTTGAAAATATTGATAGGAGCAGCCCGAGGGCTAGCATTCTTGCATTATTCGAAGCAGCAAGTTATTTATAGAGACTTTAAACCTTCTAATATACTTCTTGATTCGGTATAAAGCAAATAAAATAAAATTGTTATTTTAGTGTATATTTAGTATATGGTTTATATGTTTGCCTGTGTTGGTTGGGCAGAATTACAATCCAAAACTATCTGATTTTGGAATTACAAAGAATAAACCAAATGGAGAACACCATCCCGTGGCTCCTCAGATTATGCAAACTCATGGATATGCTGCTCCTGAATATATTGCTACAGGTTGTTATTTTGTTATAATCCTGCTCTGATATAATCACTAATTGATCTAAAGTACAAATGCTTTTCATTTAGAGATCAAATCTGCGAATGAATAGTGTAGTTCTCAACCAGAACTTATGATACAAATTCTAATACAATCATACGCTAAGTTTATATTCAATGAAATTAGTAACTGTTTTTTCTTTTGTCATGATCAATTTTTCCCTTCAAATAGTGTTTCTCTGGTTTTTGAAATACATTGGCCAGTAAAGTCGTTGTCAACTAAGAACTTAATTTGTAACTATTCAACCACTCCATTTTACTCAATTGTTAATTCATGCAGATAACATTGGTGATACAATATTCAGGTCATTTGTTCATGAAAAGTGATGTATATGGGTTTGGTGTAGTACTGCTAGAAATGCTATCCGGTCTAAGAACAATCGATCACAACCGTCCAAACCAAAAGCGGAACTTGGTATACTGGGCAAAACCATACTTGCTACATCGAAGAAATCTAATCAATTTAGTGATGGATAAGAGTTTGAGAGGACAATATCATCCGAAGGCTGCACTTCAAGCAGCCCAACTCACCCTGCGTTGCTTAGCTACTAATCCAATAGAAAGACCGCATATGGAGGAAGTAGCCAAAATTTTACAAAAGGTTGAAGCAGTTGCGTTGAGTAGTTCGAAGGGTTCAAAATATTGTTAGTCTAAGACTGTAAAATAAGTCACATGAATCTGTGTAATAATAAAAAATAAATATCATTTTAGACATTTTGACATGAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008812270.1	4.0e-115	probable serine/threonine-protein kinase PIX13
Swissprot	Q65XV8.1	1.0e-99	Receptor-like cytoplasmic kinase 176
trEMBL	A0A8T0QFZ2	2.7e-113	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G02290.1	52.14	2e-101	366	NAK	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02312	AT5G02290.2	351	163	4	9	356	5	353	52.14	2e-101	366
AfisC4G02312	AT5G02290.1	351	163	4	9	356	5	353	52.14	2e-101	366
AfisC4G02312	AT2G17220.2	359	159	4	2	359	21	372	53.48	2e-101	365

Ortholog group

Species	Genes
Allium cepa	g319626.t1
Allium fistulosum	AfisC4G02312
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	104	350	130.1	8.2e-38

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network