result

Gene information

Detail information of AfisC4G02316

Location

Gene	Chr	Start	End	Strand
AfisC4G02316	chr4	438978354	438981000	+

Sequences

CDS

Protein

Gene

>AfisC4G02316
ATGGGAAATTTTTGTTTTGTTCCTTCTAAACCTCAAAGCAGTACAATCCTCACTAAGTCATCCATAGGTACCTTGCATATATGTATTTTTCTTGCTATGTTTGTTTTTCTTCTGTTTATTTTATGGCCTGATTCTCTTTGATTTTATACAGGGTAATGATATGTATATAGTTTCTCAGTTAATATATTTGCTAACTATAATTGAATTCCTCTTTAAACTGTAGGCAACAATTGTGAAACGGATACAAACATAACAAGTAAGTTACCAAGCGTTGGTAACACAGAAAGCATCAATGGTCAAATTCTTGAAGTTCCTAATCTCAGAATTTACACATTCGATGAACTGAAGACAGCAACAAGAAACTTTAGACCGTATTCTATATTCGGAGGAGGATTCAGCATGGTTTACAGAGGCTGGGTGGATAGGAATACTCTGAATCCTACAAAAGCAGAGCAAGGAATACTTGTCGCTGTTAAAATTCTTAATCCTGAGAGCACTAGCAGACTGAAAGAGTGGCAGGTAAATAAATAAACCAAAGGACAAATTTTCGATTTTGGCCGTAAAAAAACTTATTTTTTAGATCCCGTTCAAAACTTATTATGAAAATATATCGCTTTTTCGCTATCCATCAATTTGTACGTGTACATTTTGAAAATGTGCATGTACAAACTTATACTTCGTATTTTTGTGCAAGTACAAAGTAAAAAAGTTTATTCTAGCACATTTTCGAAAGTGGAAATTAGCTACAAGGGTCTTTTTAGCAAATACAATTAATTTTTAGGACACACAATTGAAATAATTACTTTTAAGGACAAAATGCAAAATAATTAGTTTCTAAAGCCTAAAAACCTATGAAATTATTTTCTTGAAAGTAATTGGTCTGCTGACTTTGTCCTTAAAAGTAATTATTCTGCTGACTTTGACATTGAAATTAATTTCTGTGGATGTGTCCTAGAAACTAATTGAACTGCAAGGTTTGTCCTTCTTGTGAAATGCCTCTTTTCAAAATGTACCGAATAGCGCAAAATAGACCTATTTTAATAATAAGTTGAACGACGTTTAAACTTGAAATAATTTTTTTATCTTGAGGCTGAAATAAAAATTTGTCCAAAACTAAATTGGGCCAAATAAACTAAAAAAATCATCAAAAAATTCAACTTTTGATACTGTAAGTGTACAGATTAGTTGACATGTTGATTAGTCTGTTAAATTAATAAAACTTTTATTTCTTTTCAATACCTTGTCAATTGATTCATTCATTGCAATTAGGCATATAAACGGTCAGATACGGATTCGGAAAGTGTCATATCCATATCCGTATCCATAGATACAGACGGATATCAGATATTTATAGGATATTCTTCGATCAGTTCGTAACTAATAAATCTAAACAAACAAATAATTTATTTTGATTTATTATAAATCCAGTACTAAAAATATAAAACGTAATAAATACGCTACAAAAAATAACTTTTAAGTAGCAAATATTGATTTTTATATACATATTAATATTTGTTATTTAGATAAAATATTAAATAACAATCATTTTGTGTACCAAAATACACAAAAAATAACCATATTTTTGATAAAAACCGGACGGACAATTATCGGATACGGATATGGTATCTGGTTTTTTGGATATCAAATATTTTTTTATATTTTGGGTATGAATACGGACGGATTTTTCGGATAATCATTGACAGTTATAATTGCAATATGTAGGCTGAAGTAGATTTTTTAGGAAGATTATCACATCCAAACCTGGTGAAACTCTTGGGATATTGTGTTGATGGCACAAAACTGCTTGTTTATGAATACATGGCAAAAGGAAGCTTAGAAGATCACTTATTCAGAAGTGAGATTTTTTCCCCCCCTTTTCTTACAAATTATCTATTTAAATATGACTTGATCTTACATACGTATTCGTTTAGGACATCTATTTATTCTTTTGATACCTCTTTACTTTGAAATCGGATTATAACATAGATAGATTTCTTTTTCTGATATCTATTTATATTGCAATGTGTGTAAAAAGTATCTGTGCATGTTTTATTGAACAGAAGCAACTGAACCTGAACCACTGCCATGGAATATAAGGTTGAAGATAGTGATGGGAGCAGCCCAAGGACTAGCATTCTTGCATTATTCTAAGAAGCAAGCGATTTACAGATACTTTAATTCTTCTAATATACTTCTTGATTCGGTACATACATAGATAAAAAATAGAAATGTAATTTTAGTCTGTGTTTAGCATGTGGTTTAGATATTTGTATTTGTTGGTTGTGCAGGATTACAATCCGAAGCTTTCTGGTTTTGGGATAGCAAAGAATGAACCAACTGTAGAAGACTGTTGGGTGACTTCTTCTGGGATTATGGAAACTTACAAATATGCTGCTCCTGAATATGTTGCCACCGGTAGTTTCTTGTTATGACTTATGAATCAGCTTTGATATAATTGCCAATTGATCTAAACCACATAAATATTTTAATTTAGAGATCATCCACCAGAACACAAATTTTAATACAAGCATCTACTGACATTAATTAACCATGTTAAAAAAATAAAAATAAAAACCTTGTTCTAATTTAGCCATGATAAATTTTTCCTTCTAAACAGTATTTCTCTGGTTTTTGAAATACAGGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009395361.1	3.1e-74	PREDICTED: protein kinase APK1B, chloroplastic
Swissprot	Q65XV8.1	2.3e-66	Receptor-like cytoplasmic kinase 176
trEMBL	A0A804IL61	2.3e-74	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17220.1	58.69	5e-68	254	Kin3	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02316	AT2G17220.1	213	83	4	46	256	63	272	58.69	5e-68	254
AfisC4G02316	AT2G17220.2	213	83	4	46	256	62	271	58.69	6e-68	253
AfisC4G02316	AT4G35600.2	215	82	4	44	256	61	271	59.07	1e-67	253

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	78	254	93.7	1e-26

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network