result

Gene information

Detail information of AfisC4G02470

Location

Gene	Chr	Start	End	Strand
AfisC4G02470	chr4	470240231	470241928	+

Sequences

CDS

Protein

Gene

>AfisC4G02470
TAAAAACTCTGCATCGAAAACTATCATCTCTCCTTATTTTTAAAACGTCTATAAACGTATATCCATTGGCACTAGCTACCTAAAATCCAGAATAAAAGTCAGAAATTGAAGAGCAACATTTGACCTCTGTTTCCATTTATTGCTTTGAAGAGATTTTTTTTAAGGAAAAAGGTAGTTGCAGAACGTTGCAATTGCTGTTTAAAATTCATTAATGGAGAGCCTTCCAAGTATCATTAACTCTTTTGTAAGTCTTTCTTATTTCCTTTTCTTTTTCAAAGGCACCAAGCTTGAAATCTCTCTTGTTGATATTATCTCATATATTTTAGTAGTGATGATAATAATAATATAAGTACTATTATTTAGTTATATGGGGAGAAAATGGAGGTGGGTTGCCCTCAGATGTCCTTTCTGCAGATGCTCAATGCCACCACACGGCATGAAGAAGAAAACGGAGAGTATTCTCAGTGGTTGGAAAAAGAAAGAAACGAGGTCGGTGTAGGTGCTGTAATGGAAAAGAGGAAGAAGAAGAAGAGGACGTGGGTTCCACAGGCTGTGATGGCGACGGGAAGGAACGAGGCGGAGAGGCAAAGGATGAACCATATCGCTGTAGAGAGGAATAGAAGAAAGCTCATGAACAGTCGTCTCGCTGTTCTTCATGCTCTCTTGCCTTCTTCTCTAGTCCAACGGGTACGTTTTCATAAATCATTAAATTTTATTTTGTAGTCTGATTTGATTAGATAGATCATCACAGTATGTTCATTTCTTTTTCCATGCACTAACAACATTGATATTGAATGTATAGAACGATCAGGCATCAATAGTAGCTGGAGCAATAGACTACATAAAGTCACTTGAACAGCTTCTCATCTCCCTCCAAGCCAAAAAAACTCAGCATATGAAAAACAATCAACATAACCTAACAACGTCGTCGTCGTCATCGGACACTGATAACAACAATGACATTGCCAAAGCAGCAGCAACTCCAATACTAGACTTCCTAATATCACCACAGCACGTGTCGTACACAGAAAGCAAATGTGGGATCGACGTAAAGGCCACAGTAGTTCAAGGCCATGTTAATTTGAAAATAGTTGGAAAAAGGAATCAAGGGCAATTGGTTAGAGCAATTGGGACACTGGAAGAGTTTAGACTCTCTGTTATGCATCTTAATATCACTTCTTTGGATGCTTCTTCTGTCTTGTACTCTTTAAATCTCAAGGTATTAGTTATACTTCCTTCTCATTTGTCCAGTGTTTTGTACAGTTTAACAAGTTTTAATGTGATTATTATGTGAATGAATGAATAGGTAGAAGAAGAGTGCAAGATGAAGTCAGCTGATGAGATTGCAAGTCTGGTGCATCAAATATTCAACTACGTCAACGCTTGCTGTGTTGATTGACGCATTGTTGAATTATTTGTTTGGGTTTTGCATCAGATATAGAAAAGAAATGCGGTCCTAAATGTTTCTGATTCTGCATTATTTTCTCTCTACTGCCTGCAATTTAACAGCAATGAAAAGCTTACGCAGACCTGCAGCTTTCTATTGCATCTTTTCTTTTTGCAGTGTTAGGATTTTGTACTCTACTTTGACGATTCTTCTGTTTAATTTCTCTCATTTTTTTCTTCTTTATGTTTGTACTGGTTTGTTCTTGACTTTTGTTGAAATTATTTTCTTGTTCTGTCTTGTACTTAGTTTGG

Functional annotation

Database	accession number	e-value	annotation
nr	QDF82401.1	1.6e-50	transcription factor bHLH57-like isoform X1
Swissprot	Q700E4.1	7.7e-34	bHLH transcription factor bHLH067
trEMBL	A0A4Y6JKQ8	1.1e-50	Transcription factor bHLH57-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46810.1	46.50	3e-41	165		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02470	AT2G46810.1	200	90	3	82	280	187	370	46.50	3e-41	165
AfisC4G02470	AT4G01460.1	208	105	3	80	284	107	305	43.75	1e-39	160
AfisC4G02470	AT3G61950.1	230	111	2	62	280	141	354	40.00	7e-39	157

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	86	137	45.9	3.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0010377	P	guard cell fate commitment
GO:0010444	P	guard mother cell differentiation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045597	P	positive regulation of cell differentiation
GO:0051782	P	negative regulation of cell division
GO:0061086	P	negative regulation of histone H3-K27 methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network