Detail information of AfisC4G02775


Location
GeneChrStartEndStrand
AfisC4G02775chr4530156891530189482-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257483.10.0e+00protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X2
SwissprotQ7X9V2.10.0e+00Protein CHROMATIN REMODELING 13
trEMBLA0A5P1FBA70.0e+00Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G12810.155.710.02013chr13;PIE1;SRCAPSNF2 domain-containing protein / helicase domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07529.10HSADomain279357.31.3e-15
PF00176.20SNF2_NFamily476750234.01.8e-69
PF00271.28Helicase_CFamily1000111169.23e-19

Gene Ontology
AccessionOntologyName
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0000812CSwr1 complex
GO:0003676Fnucleic acid binding
GO:0043486Phistone exchange
GO:0042742Pdefense response to bacterium
GO:0004386Fhelicase activity
GO:0005829Ccytosol
GO:0005198Fstructural molecule activity
GO:0005618Ccell wall
GO:0005794CGolgi apparatus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009910Pnegative regulation of flower development
GO:0046686Presponse to cadmium ion
GO:0048451Ppetal formation
GO:0048471Cperinuclear region of cytoplasm

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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