Detail information of AfisC4G02986
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC4G02986 | chr4 | 571533678 | 571534030 | - |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | XP_006426611.1 | 7.4e-27 | PHD finger protein ALFIN-LIKE 4 isoform X1 |
| Swissprot | Q5XEM9.1 | 1.4e-25 | PHD finger protein ALFIN-LIKE 5 |
| trEMBL | V4SRT9 | 5.3e-27 | PHD-type domain-containing protein |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT5G20510.1 | 80.33 | 2e-26 | 114 | AL5 | alfin-like 5 |
| Species | Genes |
|---|---|
| Allium cepa | g305003.t1 |
| Allium fistulosum | AfisC4G02986 |
| Allium sativum | |
| Arabidopsis thaliana | |
| Oryza sativa |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF00628.26 | PHD | Domain | 46 | 94 | 44.4 | 9.9e-12 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0003714 | F | transcription corepressor activity |
| GO:0016020 | C | membrane |
| GO:0005829 | C | cytosol |
| GO:0005634 | C | nucleus |
| GO:0006355 | P | regulation of transcription, DNA-templated |
| GO:0008270 | F | zinc ion binding |
| GO:0009414 | P | response to water deprivation |
| GO:0044212 | F | transcription regulatory region DNA binding |
| GO:0016036 | P | cellular response to phosphate starvation |
| GO:0045727 | P | positive regulation of translation |
| GO:0016569 | P | covalent chromatin modification |
| GO:0035064 | F | methylated histone binding |
| GO:0043565 | F | sequence-specific DNA binding |
| GO:0048767 | P | root hair elongation |
| GO:0055065 | P | metal ion homeostasis |
| GO:0071472 | P | cellular response to salt stress |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| - | - | - | - | - |