result

Gene information

Detail information of AfisC4G03109

Location

Gene	Chr	Start	End	Strand
AfisC4G03109	chr4	595524199	595527602	+

Sequences

CDS

Protein

Gene

>AfisC4G03109
ATGCTAGACAATTTAATTGGAAAGGGAGGAAATTCATATGTATACAAGGGTTGTCTTCCTGGCGGTGAACTTGTAGCAGTGAAAAAGCTAACAATGAAAGAAACTGGAAATAAAAGGACTGGAGCTTTTCTATCAGAGCTTGGTATAATGACTCATATTAACCATCCAAATGTTGCACGATTACTTGGGTATAGTATTAAAAGAGGATTGCATTTTGTTCTACAATATTCATCTCGTGGAAGTCTTGCTTCTGTTCTCCATGGTATATCAATGTCTTTTTAAACTTTTTTTTTCCTTTAGCATATAGTATTGAAATAGTATTAAAGTTTCTTGCAGGCGTAATTCTAGTAATGAAAGAAAGTTTTTGGTTACGCAGGTTCAAAGGATGTTCTAAATTGGAAAATGAGGTTCAAAATAGCTTTAGGCATTGCGGAAGGGCTGTCATATCTTCATGAAGGCTGTGAAAGACCTATTATTCATGGAGATATCAAGACATCCAACATTCTTCTCACATCTGATTACCAACCTCAGGTATAAATTAACTACAACATTGGAATACTACCAGTTGCAAAATCTGAAATTAAATATATTCTTTGGTTTTGAGGGCACTGAATATCAATGAAAGAATTTTAAGCCACTGCATCTTAACAATTTTCGACGTTCATGTTAATTAACACAGATCTCCGATTTTGGGATTGCAAAACGACTTCCTGAAAACTGTGATCACCAAACCGTTTCTCCTATTGCAGGCACTATTGGGTAGGAACATTTACAAATTTTGAAATGATTACTTCTGAGTAAAGGCAGTGTATAGTTTAATATGCTTGAGTTAACCATGTTTTAAATTGATTAATACAGACATTTGGCTCCAGAAGCTTTTATGCATGGATTGGTTAGTGAGAAAACCGATGTATTTGCATATGGAGTTTTGCTGCTTGAGTTAATTACAGGACGTCATGCTGTTGACTCTTCTCAAAAGTACCTTGTCAATTCGGTACAATATTATTACTATCAACATTTATCCTTGGTGTTTATAAAAACTTTGAGCTTACACTTAGAGCCTAGTAAAATAATGCATATGTAATCTATCATAGATGATATTTAGCATGTTGAAGATGAGCCACAATTTAAGATAAGCAAAATTTAGGTAGACTAGAAGTTGTTTATACATACACATGCTGACATAAACATATATCAATTAGGATCACATATATCAATAAAGATTTGTTACACCTCTCTTTCGCTACATCCCATTCTACACCCCTTCGTATTTTAGAGCTACACAATTTGAAGTGATATGAAACTCCGAGAATGTTCTATCTACACTATGCACATCATATCCCAAAAAAGGTCATTTTGAAACAAAGGTCATTTTGAAACAAAAAATTAAAAATTAAAAAAGTAAGTAAACAAGCAAATATATAATTAAAAAATCAAAATGGGCATGGATTGTTGGACTGTAGCACTGGTGATGGTTAAAAAAGGAATAAATAGAAACAAAGGTCATGGTCTCAAATGGATATGCGGATAATGATTCATCATCCATATTCTCTGACTAGTGTGGGTGTTTGGGTGTACAATTTGTAAGCAACTTAATCTTATTACTGGAGAGACTATTTACATATTTAAAGCTCACTGTTGGTTTACATATATAAAGCTTATCGTGTCATATATAACATGTCTTTACTATATGCTATTGAAAAGTGAGTCGTTTAATTAATTAATACAGATTAGACATCAAGCGCTGAGGCATAGTTTCCCTTGTAATGGTTGACAAATCAAATCAATATCCAAATGGTTAAAGGTTTACTATTTCAATACTATATAAAAATAACATGAGTACATTCTCTTTAAATATTTCTATTAGTGTGTGATTCGTACATGGTTTATATTTAATATGATAATTGAATGTCTTGTGAAAATATAGTTTTATTGTTTCATGTTAGATGCAAATTGTTAGTGATTAATAACTTTAATGTAATGATAGTAAGATAACTTTCGTAAATTGTCTTATGGATAGTAAGATAACTTTATGTATGCTAGAAACATGTATGCAAAAAATATTCTCAAATCTGAATAACTATTGTTAAAAGCTTTTATACGTAAAGAGAAGCACAACTTTGATGGTATTTGTACATAAAGTTTGTTCCTTCTAAAATCTGAATTACTTTGATAGTGAAGAGAGTTCAAATGACTATAAAGAGAAGCAGGCTTCGAGGAACATCGTCACAAAGAGAATTATACATGCAAGTTGGAGCGGAATACATAAGACAAGTAACTACAGTCGTAAAAAGTCACATTAATTCCTTAAAATCACCTTCAGGTCCATCTTCTCTTAAAGGTGAAATTTAGTAGCTCTTATTTTGTAATATCTTCAATACATTTGTTTTTGCTGTCTTCTTTACACATGTTTATTGCTATAGATGATGCTATGTCTTGCTTGCTACAATTGCAAAGTTCCAGTGAAGTTAAAGATTCGGAATCACCTATCTGCTTAAAACCGGGAAGCGGGTATTCTCATGTATTGTAAGTTTAAAACAGAGTATATAACTGCACACAGTTGTCGTAATTTAACTGAAATTGTGAATTCAAATTCAAAACTTGTTGTAACAGTTTTCCAGAGAATCAAGCAGATGCACTTGTTGTAGAAATTTTAGACAGTAAGAATTGCAGCAAAGGACAAGTGACAATTCAAATATCTTCATTGCAATATGGCCATGTATGCATGTTTTAATTTATAATTTCATTATTTTTTTAATTTATTTTTGTGAAGTTCTTTAGCATTTAAGTCGTATAAATTTTAAGGGGGAAGCAAATGCTTCTGAAGTGGTCGCTTGTGTTTATTTATATCAACTTTTATGAAATATCTGCAGAGAAGCATGCTATTGGAATGTGAAGAGCACATAGAAGCCTTATTAGCAACAACATGGCGCTTGTGGAAGCAAATGCTTCTGATTCGGTGCTGCATATGACATGAGGTATGGTGAAGTGAATTGTGAGTTCTGATTGAGCAAGGCTAGTTCGTGATTGGGAATTTTTGCTGATTTTTGGTGATTCGGGTTTGGGTGAAGAAATGATTGTGGGCAGGGAGGATGATGTCGGAGTTCGGTTGCAGTTTCAGGAGGTGGTCATGGCAAAGGTTTCGTGTTCAAATTTTAGGCAGCTACGGTGAAAAGTCGTGGTTCGATTGTTGGGGTTTGTTGTCGTGATGTAGTTTATAGGGTTGCGGAGGTCTGATGTTTAAGGAATGGCGAGGCAATGGGGGATTTTTGTGGTTACAGGCAGAAGACTGTGGAGTGGTCGATGGTGGTAGCTCGGTGGTAAATGACAGTTTTGTGGCAATCTTTGCTGAGGATTTTGGTTATGCAGTTTATGCTGTTGTGGAGGAGTATGGTTGTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	MQL72235.1	4.7e-75	hypothetical protein
Swissprot	Q8H1D6.1	1.6e-67	Protein ROP BINDING PROTEIN KINASES 1
trEMBL	A0A843TMD7	3.4e-75	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G65530.1	65.67	3e-72	268		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G03109	AT5G65530.1	201	66	2	3	201	147	346	65.67	3e-72	268
AfisC4G03109	AT5G10520.1	202	75	1	3	203	156	357	62.38	2e-69	259
AfisC4G03109	AT5G35960.1	200	78	1	2	201	136	334	60.50	2e-67	252

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	4	202	132.9	1.1e-38

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005829	C	cytosol
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0005983	P	starch catabolic process
GO:0007166	P	cell surface receptor signaling pathway
GO:0009414	P	response to water deprivation
GO:0009570	C	chloroplast stroma
GO:0009623	P	response to parasitic fungus
GO:0009814	P	defense response, incompatible interaction
GO:0009934	P	regulation of meristem structural organization
GO:0010075	P	regulation of meristem growth
GO:0010150	P	leaf senescence
GO:0010480	P	microsporocyte differentiation
GO:0012505	C	endomembrane system
GO:0016161	F	beta-amylase activity
GO:0019901	F	protein kinase binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0043167	F	ion binding
GO:0043621	F	protein self-association
GO:0046777	P	protein autophosphorylation
GO:0048229	P	gametophyte development
GO:0051020	F	GTPase binding
GO:0071369	P	cellular response to ethylene stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network