result

Gene information

Detail information of AfisC4G03226

Location

Gene	Chr	Start	End	Strand
AfisC4G03226	chr4	616868665	616869937	-

Sequences

CDS

Protein

Gene

>AfisC4G03226
CAACATTTAAGTAAATACACAGCTATTAGCTTAATTTTTGCACTGGGGGTCCTCTTTTTCTGCAATTAAATATTCCCTCTTTATTTTATTTACTTGTGCTACTACTACTTAAAAGCCACCTCATTGCAATAGGTACAACAACTTGGAATTCCTTCTCTCAAACTACCACCAATAAGCATCCAACAATGGAATATGGGGAACCAAACACTTCCTCTTCGGACTCCTCTTCATCTTCCACTTCTTCCAAAAAGCGCAGCATCCACTCCACCACCATAGGCAATGAAAGCAGAAGCTCAGTCAACAAAAAAAGCAAAGACGAAAAGCACCCTACTTACAGGGGAGTCAGGATGCGCAACTGGGGCAAATGGGTTTCAGAAATCAGAGAACCCAGAAAAAAGTCCAGAATCTGGCTAGGCACTTTTCCTACTGCAGAAATGGCTGCACGTGCACACGACGTGGCTGCTCTGACCATAAAAGGTGAATCTGCTTATCTGAATTTTCCAGAATTGGCATCGCAGTTGCCGAGACCAGCTTCTACTTCACCTAAAGATATTCAGGCAGCTGCTGCTAAAGCGGCAATGTTAGACTTCACTGACCTTAAAGCTAAAGAAAAGCAGGATTTACCAGCTGCTGCTGCTAGCAGCGATGATGAGAACACGCTCTTTGATCTGCCTGATCTTTTGCTTGATTTAAGAGAGAGTTTCAGTCGATCTAGTTCTTGGGTTTCTTTGGTCGATGATATTGAATTTCGACTCGACGAGCCTTTTCTTCTGGAGTACTACTAGATTTGCTGCATACTTATTAATGTTATACACTGAAGTTAGAGAAATAGGCAGTCTACCTTGTAATGTTTTGGTCATTGTTAGTATGTATTATTATTACATTTTTGATTCGTGTTCAATGTTGTACCTTGGTTTAGATGCTCAAGTGAGAATGCAATAAGGGTTGATCATGTGCTTTAATCACATGGAAAATGAATAACTTTTTTTTTCTTCCTTATGCTTTGTTTGATTGTAAAGCTTGATCTTCCAACAAGAAAAGGAGGTTTCCATATCTATTTGCTCACATCATCAAAGTCCTTGTTTAATTAAGTAAGTGGTAATGGTACTATGGCTTAATCAAAGGACCCATGTATTATTTTGTTTGTTTTACTAGGAGATACTAGTGTGCAATATTAGTCGTATGTATGTTTTTTTCTTGATTACTATTTTGTAGGGAGTTGATGCGTCCTTTTTATTTTTATTCTGAAAGAATTGGACAAGTAGTGGTTTCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010919644.3	3.4e-52	LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF038
Swissprot	Q8LBQ7.2	5.0e-40	Ethylene-responsive transcription factor ERF034
trEMBL	A0A6I9R9E1	2.5e-52	LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF038

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G44940.1	49.51	2e-45	178		Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G03226	AT2G44940.1	204	56	4	40	196	90	293	49.51	2e-45	178
AfisC4G03226	AT4G16750.1	188	76	4	12	199	3	179	53.72	1e-41	166
AfisC4G03226	AT4G32800.1	100	26	0	36	135	5	104	74.00	7e-41	163

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	49	99	48.0	9.8e-13

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009873	P	ethylene-activated signaling pathway
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network