Detail information of AfisC4G03327


Location
GeneChrStartEndStrand
AfisC4G03327chr4637306110637310752-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrCAN73679.16.0e-80hypothetical protein VITISV_021402
SwissprotB8BJV8.12.4e-78PHD finger protein ALFIN-LIKE 8
trEMBLA5AQG64.3e-80PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G42790.160.671e-74 276AL3alfin-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag107653.t1
Allium fistulosumAfisC4G03327
Allium sativumAsa4G02586.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family10137202.51.3e-60
PF00628.26PHDDomain18523341.39.3e-11

Gene Ontology
AccessionOntologyName
GO:0003714Ftranscription corepressor activity
GO:0016020Cmembrane
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0009414Presponse to water deprivation
GO:0044212Ftranscription regulatory region DNA binding
GO:0016036Pcellular response to phosphate starvation
GO:0045727Ppositive regulation of translation
GO:0035064Fmethylated histone binding
GO:0043565Fsequence-specific DNA binding
GO:0048767Proot hair elongation
GO:0055065Pmetal ion homeostasis
GO:0071472Pcellular response to salt stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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