Gene information

Detail information of AfisC4G03711

Location

Gene	Chr	Start	End	Strand
AfisC4G03711	chr4	697293583	697293867	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	OMP06933.1	1.3e-14	DNA-binding WRKY
Swissprot	Q6VWJ6.1	4.9e-14	WRKY transcription factor 46
trEMBL	A0A1R3IMM2	9.6e-15	DNA-binding WRKY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G56270.1	79.07	8e-17	81.6	ATWRKY2;WRKY2	WRKY DNA-binding protein 2

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G03711	AT5G56270.1	43	9	40	82	507	549	79.07	8e-17	81.6
AfisC4G03711	AT2G38470.1	50	19	40	89	382	431	62.00	3e-15	76.6
AfisC4G03711	AT4G26440.1	55	22	40	94	392	446	60.00	4e-15	76.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	39	77	42.0	8e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0030010	P	establishment of cell polarity
GO:0008270	F	zinc ion binding
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009624	P	response to nematode
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009846	P	pollen germination
GO:0009863	P	salicylic acid mediated signaling pathway
GO:0009942	P	longitudinal axis specification
GO:0009961	P	response to 1-aminocyclopropane-1-carboxylic acid
GO:0010200	P	response to chitin
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0051607	P	defense response to virus
GO:0070301	P	cellular response to hydrogen peroxide
GO:0070370	P	cellular heat acclimation
GO:1901002	P	positive regulation of response to salt stress
GO:1990837	F	sequence-specific double-stranded DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network