Detail information of AfisC4G03920


Location
GeneChrStartEndStrand
AfisC4G03920chr4737084840737093688+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247777.17.5e-285auxin response factor 12-like isoform X1
SwissprotQ258Y5.15.1e-230OsARF8
trEMBLA0A5P1E5F32.3e-280Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G37020.156.850.0 749ARF8;ATARF8auxin response factor 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family5215376.79.5e-22
PF06507.10Auxin_respFamily178261111.02.2e-32
PF02309.13AUX_IAAFamily57165930.03.9e-07

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009536Cplastid
GO:0009734Pauxin-activated signaling pathway

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.