Detail information of AfisC4G03952


Location
GeneChrStartEndStrand
AfisC4G03952chr4742944936742965611-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249512.11.5e-153LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At1g21780
SwissprotQ9XHZ8.11.7e-136BTB/POZ domain-containing protein At1g21780
trEMBLA0A8B9AYB41.5e-155BTB/POZ domain-containing protein At1g21780

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G21780.171.381e-141 499BTB/POZ domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag104806.t1
Allium fistulosumAfisC4G03952
Allium sativumAsa5G03434.1; Asa5G03435.1
Arabidopsis thalianaAT1G21780.1; AT1G21780.2
Oryza sativaLOC_Os08g01320.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00651.28BTBDomain16727072.92e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005737Ccytoplasm
GO:0006950Presponse to stress
GO:0009628Presponse to abiotic stimulus
GO:0009987Pcellular process
GO:0031463CCul3-RING ubiquitin ligase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10523SPOP; speckle-type POZ proteinEC:- Hedgehog signaling pathwayko04340
Hedgehog signaling pathway - flyko04341

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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