result

Gene information

Detail information of AfisC4G03958

Location

Gene	Chr	Start	End	Strand
AfisC4G03958	chr4	745082526	745084366	+

Sequences

CDS

Protein

Gene

>AfisC4G03958
ATGCAGATGGCATCTTCTATCACAAGGCAAAGTGCTGTAGGCGGTTCAAGAAGGTCTGCTGGTGTTAAAGGATCGTCTAGTTCAGTTGAAAAGCTTGGAAGGGAGATGCTAGAGTTAAGAATAAAAGACAAAAGAAGGGACCTGGAGGATGACAATGTAAGATTCTAAACTGAATTATCGCCCCATAAGGTCATAAATCATAAATTCTTGTAGGGTAGACTTGGAAGATTTGCATCAAGCCATCTTACACAGTATATAGAGCATGAGTTTTTCCATAATCGCAAAGTATGGTTTACTTTACTTTAGGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTGAAGCTTTGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCAGCCTAAGCAGGTTCAGAATTATTCTTCAATTTTTATCTTACACATAACCGAATCATTTTCAGTATCTAATATGTAGACATCAGTAATCATTCAACAATTGCTCTATCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTTGGGGTTGTATGTCAGGTATCTTCCATTTCTTTGTCTAGAGAAAAAGTATATTGATAACCATATGAGAATGTTTTCTTTTTCCTTCAAGCCAAATGCAGAGAAACAGGAGAAATAGTTGCAATCAAGAAGGTTCTTCAAGACAAGCGTTACAAAAACAGAGAGTTGCAAATAATGCACATGTTAGACCATCCTAATATTGTTTCTCTTAAGCACTGCTTCTTTTCTACAACTGATAGGGAAGAAATCTACCTGAATCTTGAATTTGTGCCCGAGACTGTCAATCGTGTTGCTAGGCAGTATAGCAAGATGAGCCAACATATGCCTCTCATATTTGTTAAACTATATACCTATCAGGTATGCCTTATTCATGTTAACATCATATAAAACATAGAAAATAATGTTCACAGAAATTCTAGCACATTTAATTATGTATATTCTAGCAAATGCAGTGTTGTGACTAAGTGAATTGAATGCTGAGTTTTCATGTCTACATTGGTGTAGATGAATGTATATTTTAACAAAACCATTGTATCAAATATGCAGATCTCTTGCTTACATTCACAACTGCATAGGCATTTGCCATCGAGACATTAAACCTCAAAATTTGCTGGTGAGTTTAGTTTATAAACAATCCCATGGTGGTTCTCATTTCTGTGTATATGTATTTTTGCATTTATTTTTTTGAAGTTGCCTGAGTTACAAAAAGTCCTTTCATTCTGCCTGATTATCATATGTGCATTATTATTATTATTATTTTTTAAAGTGCCTTGGAGAAAAGATTATAACAAATTGTGGTACATACTGTGTTTAAGTGGTGTATTTAGGTTTAATATTGATGTATTGCTATTTCTAAAATCTCCATGGTATTATTAGAATTTTATGACTGGTTAGCTAGCAATAAAAATTGCAATTACACAACATAATCTTATGGTGCTAGCTGATGCAGCGTAAAGTAGAAAAGGAATATAATCGTAAACCACAAAGAAAAAGAAAGTTAAAAATTTAGAATCCATCAGAAATAATCATAATAATTTCTTGGTGTGAATTATTTCTCTTGTTGGTTTGTAATATGCTTTACCTGTTTCAGGTAAATCCACATACTCATCAGCTTAAATTGTGTGATTTTGGTAGTACAAAAGTTCTGGTAAGTCTTCATCGGCCTTAAGCATATGTATAAAACCATTGAACTAAGTATGAATTGCTATGATATTTGTTACATTGTTCAGGTGAAAGGAGAGCAAAACATCTCTTATATCTGCTCAAGATATTATCGTGCTCCGAAACTCATAAATTCGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3775799.1	1.8e-78	Shaggy-related protein kinase kappa
Swissprot	Q39019.2	9.6e-69	Shaggy-related protein kinase 41
trEMBL	A0A8K0HXV0	2.6e-79	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09840.1	57.59	5e-74	273	AtHIR1;ATSK41;HIR1;SK41	shaggy-like protein kinase 41

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G03958	AT1G09840.6	257	66	5	3	218	1	255	57.59	5e-74	273
AfisC4G03958	AT1G09840.5	257	66	5	3	218	1	255	57.59	5e-74	273
AfisC4G03958	AT1G09840.4	257	66	5	3	218	1	255	57.59	5e-74	273

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	93	166	33.5	2.4e-08

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002119	P	nematode larval development
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007052	P	mitotic spindle organization
GO:0007281	P	germ cell development
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009792	P	embryo development ending in birth or egg hatching
GO:0009933	P	meristem structural organization
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880	P	regulation of protein localization
GO:0040010	P	positive regulation of growth rate
GO:0040011	P	locomotion
GO:0042538	P	hyperosmotic salinity response
GO:0043652	P	engulfment of apoptotic cell
GO:0046777	P	protein autophosphorylation
GO:0060069	P	Wnt signaling pathway, regulating spindle positioning

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network