result

Gene information

Detail information of AfisC4G04375

Location

Gene	Chr	Start	End	Strand
AfisC4G04375	chr4	844193688	844195010	-

Sequences

CDS

>AfisC4G04375
ATGGCAGGCATGGCAGATCAAGAACAATCTAGTGAAATGCACCGCTCGTTTCATGAAGGTGACTATGAAGGCGAACTATCCCATTGCAATTACAGTGAGGAGTTCCTAAAACGTAGAATCCAGAGTGACACAAATCTTCTCAACCGCATAAGAAAAAGCAACCTCATGATTCAAGACCATCAGACCGTCCATCCCAACACGCACACACAACAAGAAACTGACATGATCATACGTAGAAAGAAATTCTTGCAAGCGCAAGACGCGATACTCGAACAAATGCTGAAAGTGATGGAATGTTGCAACGCCCAAGGCTTCGTGTACGGCATCGTGACAGAAAACGGGAAGACAGTCTCCGCCGCTTCCGATAACCTACGTAGGTGGTGGAAGGAAAACGCGAGGTTTGATTTGGATGGTCCGCTGTCTATAGAGAAGTACAAGTCTGCTCTTATGCCGCACTGTGACCCACCCCAAAGACTATTGGAGATTCAGGACACAACGCTAGGGTCCATGCTTTCAGCTCTTATGCCGCACTGTGACCCACCCCAAAGGAAGTTTCCTCTGGAGAAGGGGGCACCCCCTCCATGGTGGCCCACCACGACCGAACAATGGTGGTCTGAACTTGGGTTCCCAAATGATGATAACGGGCCTCCACCGTATAAAAAGCCTCATGACTTGAAGAAGGTGTGGAAAGTTGGAGTTCTTGTTTCTGTACTCAAACACATGTCGCCAAATACAGATAAAATAAGGCAACTGATTAGGCAATCGAAAAGCCTTCAGAGTAAAATGACTGCAAAGGAGAGTATTGCTTGGTTCGAGGTTCTTGATCAGGAAGATCGGGATTTTCAAAGACGCTGCATGGATTTGCCTAATCTGTTTCCTAAGTACAAGGTAGACGATGCAAGGTGTAAAAATGCCAGGAAGTTGGATTCTGTAGGAAATGAGGAAGTCAATCAATTTGTTGCATGTAAACGAGTTGCACTGCCAGGGCTTGAGATGAATAAGAATAAGAGTGCTCAGGATAATCAGTCCAGTCGTAGCTCACACACAGATTTTGTTCGATATAACACAAATACAGATAGCACGATGAAACTGAATTCTAATGCAGACGTGGTTAAGGATTTCTGTTATGTGCCTGAGTTGAGTATCGAGAGTAATGGTGATCATCAGAGTAATAATGGTTTGGGTCTAGTAGTGCTTGATCAAAGATCAGAGGATGTGCAGTTTCTGTTTGAAACTTTTATTCATCTGGCACTGGGAGTAAATTTCAAAAGGAACAAACTTTATTTTCCATTAGAAGTCGAAGAAACTTTGTTTTCTATTTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253600.1	1.2e-57	protein ETHYLENE INSENSITIVE 3-like
Swissprot	O24606.1	1.5e-52	Protein ETHYLENE INSENSITIVE 3
trEMBL	A0A5P1FKJ4	8.7e-58	ETHYLENE INSENSITIVE 3-like 1 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G20770.1	55.16	1e-76	283	AtEIN3;EIN3	Ethylene insensitive 3 family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G04375	AT3G20770.1	252	98	3	36	278	51	296	55.16	1e-76	283
AfisC4G04375	AT2G27050.1	253	101	4	36	278	51	298	54.15	3e-76	282
AfisC4G04375	AT1G73730.1	259	116	4	36	287	40	292	50.19	4e-69	258

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	36	277	318.3	2.8e-95

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network