result

Gene information

Detail information of AfisC4G04388

Location

Gene	Chr	Start	End	Strand
AfisC4G04388	chr4	845321818	845323128	+

Sequences

CDS

>AfisC4G04388
ATGGCAAATGGAGAACAATCTACTGAAATGCACCGTTCCCTTCATGAAGGTGACCATGAAGGCGAACAAAACGATTGCAATTACAACGAGGAGTTCCTACAACGTAGAATCCTGAGTGACACAAACCGTCTCAACCGCATAAGAATAAGCAACCTCATGATTCAAAACCATCAAACCATCGATCCCAACAAGCACACAGAACAAGAAACCGACATGATCATACAAAGAAAGAAATTCTTGCAAGCCCAAGACGCGATACTCGAACAAATGCTGAAACTGATGGAATGTTGCAACGCCCAAGGCTTCGTGTATGGCATTGTAACAGAAAATGGCAAGACAGTATCCGCCACCTCCAATAACCTTCGTGGGTGGTGGAAGGAGAACGCGAGGTTCGATTTGGATGGTCCGTTGTCTATAGAGAAGCACAAGCCTGTAAACATGTATCATCGTAGTGAGAAGAAGGCTGAGATAAACATCCGTGTAAGACTATTGGAGATTCAGGACACAACGCTAGGGTCCATGCTTTCAGCTCTTATGCCGCACTGTGAGCCACCCCAAAGGAAGTTTCCTTTGGATATGGGGGCACCCCCTCCATGGTGGCCCACCACGACCGAACAATGGTGGTCTGAGCTTGGGTTCCCAAATGATGATAACGGCCCTCCACCGTATAAAAAGCCTCATGACTTGAAGAAGGTGTGGAAAGTTGGAGTTCTTGTTTCTGTACTTAAACACATGTCGCCAAATACCGATAAGATAAGGCAGCTGATTAGGCAATCGAAAAGCCTTCAGAGTAAAATGACTGCAAAGGAGAGTATTGCTTGGTTCGAGGTTCTGGATCAGGAAGATCGGGATATTCAAAGACGCTGCATGGATTTGCCTAATCTGTTTACTAAGTATAAGGTAGACGATGCAAGGTTTAAAAATGCTAGAAAGTTGGATTCTGTAGGAAATGAGGAAGGCAATCAATTTGTTGCATGCAAACGAGTTGTACTGCCAGGGCATGAGTTGAATAAGAATAAGAGTGCTCAGGATAATCAGTCCAGTCGTAGCTCACACACGTATTATGTTCGATATAATACAAATACAGATAGCACGATGAAACTGAATTCTAATGCAGACGTGGTTAAAGATTTCTGTTATGTTCCTGAGTTGAGTATCGAGAGTAACGGTGATCATCAGAGTAATAACGATTATAGAGTTGATAAAGCTGCTGAAGTGGTACAAGATTATGGTTTTTCTGGGTTTGGATATTCGGATATGATTGGAAATTTGAATGGCTTGGAAGATTGCTTTGGGTCCGGTAGCGGTTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253600.1	1.2e-70	protein ETHYLENE INSENSITIVE 3-like
Swissprot	Q10M41.1	1.9e-60	Protein MAO HUZI 6
trEMBL	A0A5P1FKJ4	8.8e-71	ETHYLENE INSENSITIVE 3-like 1 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G27050.1	49.10	2e-72	269	AtEIL1;EIL1	ETHYLENE-INSENSITIVE3-like 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G04388	AT2G27050.1	279	125	6	14	282	27	298	49.10	2e-72	269
AfisC4G04388	AT3G20770.1	272	123	6	13	282	35	296	50.37	3e-72	269
AfisC4G04388	AT1G73730.1	260	121	4	33	291	40	292	50.38	4e-70	262

Ortholog group

Species	Genes
Allium cepa	g240723.t1
Allium fistulosum	AfisC4G04388
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	33	281	323.2	9.1e-97

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0010182	P	sugar mediated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network