Detail information of AfisC4G04402


Location
GeneChrStartEndStrand
AfisC4G04402chr4848018384848057686-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008801538.11.1e-10homeobox-leucine zipper protein HOX19-like
SwissprotA2YGL9.12.1e-09OsHox18
trEMBLA0A443N9U41.8e-10Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G22800.141.861e-1269.3HAT9Homeobox-leucine zipper protein family

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag236013.t1
Allium fistulosumAfisC4G04402
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain6511832.93.8e-08

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.