Detail information of AfisC4G04446


Location
GeneChrStartEndStrand
AfisC4G04446chr4857177500857184432-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK69164.12.0e-44uncharacterized protein A4U43_C05F20010
SwissprotQ9SSE9.11.2e-30Protein JUMONJI 25
trEMBLA0A5P1ETN31.5e-44JmjC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G00990.164.171e-42 168Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02373.19JmjCDomain218451.89.1e-14

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005654Cnucleoplasm
GO:0016491Foxidoreductase activity
GO:0009555Ppollen development
GO:0009908Pflower development
GO:0031490Fchromatin DNA binding
GO:0032454Fhistone demethylase activity (H3-K9 specific)
GO:0032776PDNA methylation on cytosine
GO:0033169Phistone H3-K9 demethylation
GO:0048366Pleaf development
GO:0060969Pnegative regulation of gene silencing
GO:0070919Pproduction of siRNA involved in chromatin silencing by small RNA
GO:0080188PRNA-directed DNA methylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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