Detail information of AfisC4G04764


Location
GeneChrStartEndStrand
AfisC4G04764chr4901127504901135610+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265511.11.7e-110chromatin remodeling protein EBS-like
SwissprotF4JL28.16.9e-96Protein EARLY BOLTING IN SHORT DAYS
trEMBLD6MKD69.6e-111Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G22140.276.005e-101 363EBSPHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag520733.t1
Allium fistulosumAfisC4G04764
Allium sativumAsa5G04059.1
Arabidopsis thalianaAT4G22140.2
Oryza sativaLOC_Os08g32620.1; LOC_Os09g21770.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01426.15BAHDomain2313589.31.5e-25
PF00628.26PHDDomain14018841.01.1e-10

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005677Cchromatin silencing complex
GO:0006342Pchromatin silencing
GO:0008270Fzinc ion binding
GO:0009640Pphotomorphogenesis
GO:0009845Pseed germination
GO:0009911Ppositive regulation of flower development
GO:0031507Pheterochromatin assembly
GO:0035064Fmethylated histone binding
GO:0035067Pnegative regulation of histone acetylation
GO:0048579Pnegative regulation of long-day photoperiodism, flowering

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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