Detail information of AfisC4G04768


Location
GeneChrStartEndStrand
AfisC4G04768chr4901785075901798600+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265513.14.9e-226LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY 8-like
SwissprotQ6R2J8.11.7e-167Leucine-rich repeat receptor kinase-like protein SRF8
trEMBLA0A6I9SI543.0e-225protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G22130.159.610.0 833SRF8STRUBBELIG-receptor family 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag213657.t1
Allium fistulosumAfisC4G04768
Allium sativumAsa5G04062.1
Arabidopsis thalianaAT4G22130.1; AT4G22130.2
Oryza sativaLOC_Os02g09740.1; LOC_Os02g09740.2; LOC_Os06g42800.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08263.9LRRNT_2Family236232.95.1e-08
PF13855.3LRR_8Repeat11016836.13.5e-09
PF00069.22PkinaseDomain405676147.34.7e-43

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0002221Ppattern recognition receptor signaling pathway
GO:0005829Ccytosol
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0004702Freceptor signaling protein serine/threonine kinase activity
GO:0007169Ptransmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006979Presponse to oxidative stress
GO:0007623Pcircadian rhythm
GO:0009506Cplasmodesma
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0009860Ppollen tube growth
GO:0010059Ppositive regulation of atrichoblast fate specification
GO:0010063Ppositive regulation of trichoblast fate specification
GO:0010071Proot meristem specification
GO:0010305Pleaf vascular tissue pattern formation
GO:0019901Fprotein kinase binding
GO:0042127Pregulation of cell proliferation
GO:0046777Pprotein autophosphorylation
GO:0048366Pleaf development
GO:0048481Pplant ovule development
GO:0048768Proot hair cell tip growth
GO:1900459Ppositive regulation of brassinosteroid mediated signaling pathway

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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