result

Gene information

Detail information of AfisC4G04891

Location

Gene	Chr	Start	End	Strand
AfisC4G04891	chr4	919255562	919256423	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAF6161766.1	2.9e-28	hypothetical protein GIB67_013843
Swissprot	P46665.3	3.5e-23	Homeodomain-leucine zipper protein HAT14
trEMBL	A0A7J7N3T6	2.1e-28	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G06710.1	54.39	5e-28	120	HAT14	homeobox from Arabidopsis thaliana

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g80607.t1
Allium fistulosum	AfisC4G04891
Allium sativum	Asa5G04096.1; Asa5G04097.1; Asa5G04181.1; Asa7G05806.1; Asa7G05807.1; Asa7G05808.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	74	128	59.4	1.9e-16
PF02183.15	HALZ	Family	130	163	33.5	3.1e-08

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0008283	P	cell proliferation
GO:0009506	C	plasmodesma
GO:0009585	P	red, far-red light phototransduction
GO:0009641	P	shade avoidance
GO:0009733	P	response to auxin
GO:0009735	P	response to cytokinin
GO:0009826	P	unidimensional cell growth
GO:0010016	P	shoot system morphogenesis
GO:0010218	P	response to far red light
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0048364	P	root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network