result

Gene information

Detail information of AfisC4G05134

Location

Gene	Chr	Start	End	Strand
AfisC4G05134	chr4	951677951	951679777	-

Sequences

CDS

Protein

Gene

>AfisC4G05134
ATGGCAGCAAATATAGGATTAGTTTCATTAAGCCAAATTCAAAAATTACAAATAAACAAGAATGAACCATGGGAGGTGCCAGCATTTGAAGAAGATAGAAGCAACACGATGGGTGCAACATGGCCACCAAGATCATACACTTGCTCTTTCTGCAGAAGAGAGTTTCGATCAGCTCAGGCCCTTGGTGGTCACATGAATGTGCACCGTCGTGATCGTGCTCGTCTTCGTCTGTTGAATAGTTCTCAAGTTCTTGATGATGCATCAAGTGCAGTACCTGTTTTTTTTTCCAGTTCTAGTGAGATTGCAAAGTCTAGTGGTACTGGACTATTCCTTTTCTATCCAGTTCAGGGAGCTTATGAGAAGGAAGTTGATTACTTTGCTGCTTCTTCATTTGCAAATGGTATTGATGGAAGATCAATTTGTGAGAATAATTATAATGGAGTTGTAGAGGAGTTGGATTTAGAACTTAGGTTAGGATGGTAGTTTTATCATTATGACCATGGTTTTTTATTATTATATAAGGATAAAGACAACAAACTTCTGTATATATTGCATCCTTGTAAATCAGAGGATTATGCCATTATTGTGTAGGGAAGTCCCAGAATAATTTGATGTTTTACTAACAAGTTCACTTTCCTCTTTATTGTTTACTTTTATGCTGAACGAACGAGCTACATACCAGTTCACTTTCTTCTTTGTTTTTTACTTTTACACTGAACGAATGAGCTGTGCAACCCGTTGGAAAATTATGTTGGAGAATGATGGCAATACCAAGACTAAGCTATAAATTGTTGGAAAAACAATTCTTCTCTTAGTGGCTTGAATTACATGGTTTTATATAGGACAATTTTTCAAAAAGGACCTGCAGAAAAAACTTATTCCGCTATTAGACCTTAGCAAAAACTTATTGCGAAAATAGGCCTCGTTTTAGATAATATTTGTGCAAATTTAGAGTGCGCAAGTATTAATTTTTTTTATAACTAAAACTTGCGCATTCCAGAAATGCGCAAACTATATTTAAGGTTTGCGCATTTATGAAATGCGCAAGCTCATTTTCGAGCATCAAATAGACAGAGCACAGATCTGATCTCATTATACTCATTTTCTACTTTCTTCTCAAAACCCTTCCCATTTTCCATTACAAACCCATTTTTTTTACATATTCAAATCCTCAATCACCTTATCAACCAAATAGTTGTTAAACTATATATTGAATCATCTTCTTCATCGTTACAAAACAAAGGTAATAATTAATGTTGTTGAAAATTAAGATCAAATTTTGGTAGTGTTGATGGTGTTGAAATTGAGGAGTTATTGGTGTTAGAAATGTCAATTACAAGGCTATGTTGTTGTTATTGTTGAATTAGTTGTTAATGTTTAATGAACTAGAAAACCCTATTTAAGTACTAGTAAATTGAAAACCTTAATCTATATGTTAATGTTTTATTGTTTATTTTGACGGTAGATATGAATGTTTGGAAGATAGACGATGAAACGTTGATGAAACCTTGTGATGAACTTGAAGCGAAAATCGGTGTTGCAAGCTTAAGTCATATTGATTTTGATGTTGATCATGTTCCGAAAACACAGTTTGAAACAATACCGCGTAAATTCTATGTTGGACCATCAACCTTACATGCTCGTTTACGTGAAGTTGTTTCTGCCAAAAGACCCAGTCATCAAATTATAGTTGACGAAAATTTGCCGATGCCTATACATCCCGTTGGTCCATCCATGCCAAGGGGACAACGACCATATTCAAATTGTTACTGCGGAGATATGTGTGTAGTGGTCGTTTGCGAAAAGGAAAAGAATGTCGGACGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_019709269.1	1.5e-23	zinc finger protein KNUCKLES-like
Swissprot	O80942.1	1.8e-18	Zinc finger protein 10
trEMBL	A0A6J0PP61	1.1e-23	zinc finger protein KNUCKLES-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G17810.1	61.73	3e-22	102		C2H2 and C2HC zinc fingers superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05134	AT4G17810.1	81	29	2	11	90	11	90	61.73	3e-22	102
AfisC4G05134	AT2G37740.1	72	25	1	19	90	14	83	62.50	5e-21	98.2
AfisC4G05134	AT3G23130.1	61	18	1	20	77	18	78	65.57	6e-19	91.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13912.3	zf-C2H2_6	Domain	46	69	24.6	1.6e-05

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0008361	P	regulation of cell size
GO:0009755	P	hormone-mediated signaling pathway
GO:0010093	P	specification of floral organ identity
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042127	P	regulation of cell proliferation
GO:0043565	F	sequence-specific DNA binding
GO:0090691

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network