Detail information of AfisC4G05300


Location
GeneChrStartEndStrand
AfisC4G05300chr4975759815975779577-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020111415.13.7e-107protein SET DOMAIN GROUP 41 isoform X5
SwissprotQ3ECY6.13.1e-66Protein SET DOMAIN GROUP 41
trEMBLA0A6P5GRX52.7e-107protein SET DOMAIN GROUP 41 isoform X5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G43245.132.244e-69 259SET domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag302697.t1
Allium fistulosumAfisC4G05300
Allium sativumAsa2G01659.1; Asa5G03963.1; Asa5G03964.1
Arabidopsis thalianaAT1G43245.1
Oryza sativaLOC_Os04g34610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01753.15zf-MYNDFamily357625.68.8e-06
PF00856.25SETFamily17326421.80.00018

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11426SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYDEC:2.1.1.354 2.1.1.357 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.