Gene information

Detail information of AfisC4G05467

Location

Gene	Chr	Start	End	Strand
AfisC4G05467	chr4	1007564713	1007565536	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_024954209.1	7.9e-14	calcium-dependent protein kinase 28-like isoform X2
Swissprot	Q0D715.1	5.3e-15	OsCDPK5
trEMBL	A0A8B8ZGQ7	4.4e-14	calcium-dependent protein kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G66210.4	68.85	2e-17	84.0	CPK28	calcium-dependent protein kinase 28

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05467	AT5G66210.4	61	18	1	27	86	81	141	68.85	2e-17	84.0
AfisC4G05467	AT5G66210.1	46	8	0	41	86	96	141	82.61	3e-17	83.2
AfisC4G05467	AT5G66210.2	46	8	0	41	86	96	141	82.61	3e-17	83.2

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	34	86	28.1	1.1e-06

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0005509	F	calcium ion binding
GO:0051015	F	actin filament binding
GO:0006952	P	defense response
GO:0005576	C	extracellular region
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004723	F	calcium-dependent protein serine/threonine phosphatase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005885	C	Arp2/3 protein complex
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009825	P	multidimensional cell growth
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010090	P	trichome morphogenesis
GO:0010150	P	leaf senescence
GO:0010286	P	heat acclimation
GO:0018105	P	peptidyl-serine phosphorylation
GO:0034314	P	Arp2/3 complex-mediated actin nucleation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network