result

Gene information

Detail information of AfisC4G05468

Location

Gene	Chr	Start	End	Strand
AfisC4G05468	chr4	1007565882	1007568294	+

Sequences

CDS

Protein

Gene

>AfisC4G05468
ATGCTTAAAGTTGCAGTTGAGTGCCATCTGCATGGTTTAGTACACCGTGACATGAAGCCTGAGGTACATTTTTCTTTAAACTTTTAACCATATATATAAAGCAATGAATATTAACTACTCACGAATTCATACCTAAATCATTTTCATTCCTAGAACTTTCTATTTAAATCAAAGGACACTGATTCACCTTTAAAAGCAACTGATTTTGGTCTATCAGATTATATTAAGCCAGGTTTGTCCAAACAACCATAGTTTGCACTACAAAAGAAGCATTGAAAATTTCAAGAATTTGATGTAAAATTTATTTTAATATAGGGAAGACATTTCATGACATAGTTGGTAGTGCATATTATGTAGCCCCAGAAGTATTAAAGCGCAGATCCGGACCAGAGTCTGACGTATGGAGCATTGGTGTGATTACTTATATTTTGCTATGTGGAAGGCGTCCATTTTGGGATAGAACGGAGGATGGAATATTTGAAGAGGTAAATTCAGTCATATATTACATTTATGTTTGAATTACACATGCTTGAATATTTGTTTTAGAATTTCTAACCGTTCATTTTATAAATTGATTGTTACAGGTTTTGAGAAACAAGCCCAATTTTAAAAGAAAACCTTGGCCAACTATAAGCCATAGTGCCAAAGACTTCGTTCAGAAAATGTTGGCGAAAAACCCTCGTACTCGGTTAACTGCAGCTCAAGCTTTGTGTACGTATAAATCCTGGAAAATTCATTTTTAAGAATGGGTTAATTTTACTACCTATTAGAATTCAGTGCTAAAAAAATGTCTAAAAACTACGTTTTTCTTTGTTAATACAACACATCTACATTGGATACATTCATTAAAAATTTGGAATATAAATAAAACCGCATTTTATGCAGCACATCCATGGGTGAGAGAAGGAGGCAGTGCATCGGAGATTCCACTAGATATATCCGTCCTTTCCAACATGCGCAAATTTGTGAAATATAGTCGTTTTAAGCAATTTGCACTTAGGGTAATTCTTTTGCGTATTTTTTTTAATTTTACCATGAATGCATTTGGTTGCTTATTTTCATATTTTTGTCATGTTTGTAGGCACTAGCAAGTACTCTCAATGAAGATGAACTGGCTGATCTTCGTGATCAATTTGATGCAATTGATGTAGATAAAAGTGGGTCGATAAGTCTTGAAGAGATGAGACAAGTATGTGGCATGATAAACATAATATATATATATAGCACACTTTGTAGCCCTCGATATCAGCCACAATTTTATATTTAAATACTTGGTCCATGTGACAGGAGAGAGAAAGAACAAAAATTTAAATAGAAACTTGTGGTTGATATCGGAGGTTACAAAATGGTGTTAAATAAATGATGATATTGATCCTAGCTATTATTATATATATGTATATGTGTATATGTATATATGTATATGTGTGTATATGTATATGTATATATATACATAGCACCATTTGTAGCCATCGATATCAGCCACAATTTTATATTTAAATATTTGGTTCATGTGACAAGAGAGAGAAAGAACAAAAAGTTAAATAGAAACTTGTTGTTGATATCGGAGCTACAAAATGATGTTAAATAAATGGTGATATTGATCCTAGCTCATATATATATCGACACACACCATAGCTTTTGAAATTAATTTGGATTTAGCTAACTTCTACGCAGGCTCTAGCGAAAGATGTTCCTTGGAGAATGAAAGAGCCCCGTGTTAAAGAGATTCTTCAAGCGGTAATTCACAATCATTTTGCTCTTGTGATTAGTACCCAGTGTTTTGTTTCATTATGAACTCCACGTTAAATCCAATAAACCATGACTGTGTAGAAGAAACAAAAGATGGGAAAAGCATAACCAATTATTTTGATACTTTTAATTGAAAAACTCTCAGCCTTGCATGTTATTCTGTTCATACTTGTTTGTTCTTCAAAGTTACAAACACTTCAAATCAAGAAGATAGAATCAATCTTCAGCTTCAACAATCTTTAATAGAATAACACATTTGAAGTTTACTAATTTATTTATCTAGCAAAAAACTAAAAGTATAACTATAATTTCAACTGTCAGTACTTGTAAATTGTAATGTAGATTTGCTAGTCAATTCATAATTTGAACTTTACTATGCACATGTATAACATAAACAAAAATAACATTCTAATCTCTAAGCAGATCGATAGCAACACGGATGGAATGGTTTATTTCCCTGAATTGCAACCATCCATGTAAATCAGCTGGAGGAACATGACAATGAAAAGTTTAACTCAAGCTCTCAAGCTGCATTCCATAAATTCGACGTGGATAGAGATGGATATATAACACCCGACGAACTTAGAATGGTATGCATCTTTTCTTTTAGGAAAATTTAAACGTGCACATCATGATTTAAATTATCAAAAATACCCGTTCTTGC

Functional annotation

Database	accession number	e-value	annotation
nr	AIZ68218.1	2.7e-126	calcium-dependent protein kinase 28-like protein
Swissprot	Q6Z2M9.1	2.7e-123	Calcium-dependent protein kinase OsCDPK1
trEMBL	A0A0A7LYX2	2.0e-126	Calcium-dependent protein kinase 28-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17890.1	82.87	9e-125	442	CPK16	calcium-dependent protein kinase 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05468	AT2G17890.1	251	43	1	251	218	468	82.87	9e-125	442
AfisC4G05468	AT5G66210.4	254	48	1	254	172	425	81.10	5e-124	440
AfisC4G05468	AT5G66210.1	255	48	1	255	172	426	81.18	3e-123	437

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	8	151	140.6	5.2e-41
PF13202.3	EF-hand_5	Domain	199	221	26.1	3.6e-06

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0051015	F	actin filament binding
GO:0006952	P	defense response
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004723	F	calcium-dependent protein serine/threonine phosphatase activity
GO:0005777	C	peroxisome
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005885	C	Arp2/3 protein complex
GO:0007275	P	multicellular organism development
GO:0009507	C	chloroplast
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009825	P	multidimensional cell growth
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010090	P	trichome morphogenesis
GO:0010119	P	regulation of stomatal movement
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0034314	P	Arp2/3 complex-mediated actin nucleation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network