Detail information of AfisC4G05577


Location
GeneChrStartEndStrand
AfisC4G05577chr410295213521029524854+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245915.12.9e-53LOW QUALITY PROTEIN: protein PHR1-LIKE 3-like
SwissprotQ8LAJ7.11.1e-38Protein UNFERTILIZED EMBRYO SAC 16
trEMBLA0A1D1XSR83.1e-49Myb family transcription factor APL

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G13640.149.404e-59 224UNE16Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag513488.t1
Allium fistulosumAfisC4G05577
Allium sativumAsa5G04597.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain227331.71.2e-07
PF14379.3Myb_CC_LHEQLEFamily12016382.88.9e-24

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003913FDNA photolyase activity
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009416Presponse to light stimulus
GO:0009555Ppollen development
GO:0009567Pdouble fertilization forming a zygote and endosperm
GO:0010628Ppositive regulation of gene expression
GO:0016036Pcellular response to phosphate starvation
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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