Gene information

Detail information of AfisC4G05578

Location

Gene	Chr	Start	End	Strand
AfisC4G05578	chr4	1029796255	1029797008	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245320.1	5.5e-60	ethylene-responsive transcription factor ERF062-like
Swissprot	Q9SVQ0.1	1.6e-32	Ethylene-responsive transcription factor ERF062
trEMBL	A0A5P1E6Y2	4.0e-60	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13620.1	52.72	2e-37	152		Integrase-type DNA-binding superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05578	AT4G13620.1	184	76	5	61	243	215	388	52.72	2e-37	152
AfisC4G05578	AT4G39780.1	182	78	7	76	237	91	266	42.86	1e-30	130
AfisC4G05578	AT1G78080.1	107	37	2	65	165	139	245	59.81	1e-30	130

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	78	127	50.4	1.8e-13

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005737	C	cytoplasm
GO:0005730	C	nucleolus
GO:0009611	P	response to wounding
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009751	P	response to salicylic acid
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010017	P	red or far-red light signaling pathway
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0043565	F	sequence-specific DNA binding
GO:0045595	P	regulation of cell differentiation
GO:0051301	P	cell division
GO:0071472	P	cellular response to salt stress
GO:0071497	P	cellular response to freezing
GO:2000070	P	regulation of response to water deprivation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network