result

Gene information

Detail information of AfisC4G05610

Location

Gene	Chr	Start	End	Strand
AfisC4G05610	chr4	1034804889	1034808839	-

Sequences

CDS

>AfisC4G05610
ATGGCACGGTTCTTGGAAATAATTATTGTGGGTTTATGTTGCTTTTTCATTCAAAGCAGTCAGCAACTTTCATCATCACAAACACAAGTTTTGTATCAATTAAGGAAGCAATTAGAATATCCGAAACTACTAGAAGCTTGGAATGATACTCATGTAGATTTTTGTTATCTACCCCCTAAGCCATTTTTAATGCTTACTTGTGAACGAAATTCAGTTACTGTGCTTAAAATTGTCGGTGATAAGATAGCTAGCCATAGCCCAAGTAACTATGGAGGATATTCAATTGAAGAACGCACACTATCACAAAGCTTTTCAGTCCATTCATTTGTGACAACCTTGACTAGGCTTCCTAGTTTGAAAGTATTGATTCTGGTTTCTTTAGGGATATGGGGCCCCCTCCCAGAGAAGATTCGTCGTTTAAATTCACTTGAAGTTCTTGATTTGAGCTCAAATCATCTTTATGGTAGATTACCTCCTAGATTATCTTCTATGACAAGGCTCAATACGATTACATTGGATGGGAATTATTTTAATGATACATTTCCCGGTTGGTTAAGCTCATTGACAAATTTAAAGATTGTTAGTTTGCAGAGAAATAAGTTTAGAGGATCTTTACCTCATTCGATAGGAAGTTTAAAAACTCTGACCAAGCTTTCACTTTCAAGAAATCGCATTTCAGGTAAAATCCCTGATATCGGTATGTTAACTAATTTGGAAGTCTTGGATATGAGAGATAATGATTTGAATTCTGAATTACCATCTTTGCCTATTAGTTTGGTTACAGTTTTACTGAGCAATAACTCATTGAAAGGTGAAATTCCATATCAGTATGGTGAATTGAATCGACTACAATATCTTGATATTTCTTTCAACATGTTAGAAGGAACTCCACCTTCTGTAATATTTTCATTGCCGAATATCAGCTATATAAATTTGGAGTCTAATATGCTAAGTGGCTCTCTTTCAAGAAAATTAACATGCAGCGATCAACTGGGTTTTGTTGATATATCTACCAATAGACTCAGTGGTGAACTGCCTTCTTGTTTGAGCTCTTATTCGAATAAAAGGGTTGTGAAATTTGATGGAAATTGCTTGACTGTTAATGTTAAAAATCAACATGATTTTAACTATTGCTCAGAAAATGGAATGCAGAGAAACTCTGATGTGGGAATTATGATCGCTTCTATTGTAGGAATGGTTTTTGTGTTAATATTTGTCTCGATTGTGTTAGTGGTATTCTGTAAAAGAAAATGTCAAAGAGCTATAGCAGAGCAAAGCCTGCTACCAAAATCTGTACCAGAAACTTCAGCTACAAGCTTCTCTTCTGGACTTATCGCAGATGCTGGATACATAACTGAAAATACAAATTTTGGAGCATCTATTTTGCCTACATATCGAGTATTTTCTCTTGAGGAATTAAGAGAAGCAACAAGAAATTTTGATAGTGCATCATTTATTGGAGAGGGATCCATTGGAAAGCTATACAAAGGAAGACTAGAGAATGGGACATACATTGCTATAAGATGTTTACCATTGTTTAAAAAATACTCAATCAGAAACCTAAAACTTCGTTTGGATTTGCTTTCAAAGCTTAGACATCCAAATTTAGTTTGTCTCTTGGGCCATTGCATCGATTCTTCACAAGATGATTCAAGCGTTAACACCATCTTTCTAGTATATGAACATGTGCCTAATAGAAATTTCAAGGCTCACTTGTCAGAAAATAGTCCAGAGAAGATTCTTAAGTGGAACGATAGGCTAACTGTTCTAATATGTATCGCGAAAGCTGTGCACTTTTTACACACTGGAATTATTCCTGGTTTCTTCAGTAATCGGATTAAAAGCAGCAGTATTTTGCTGGATGAGCACAACATAACAAAAGTTAGTGACTATGGGTTGTCAATTATTTCAGAAGAAATTTACAAACAAGTGGCAAAAGGTGAAAACCAGAAAGCTATCCGAAGTAAAGCTGCAGCGAAAGAGAACATAAACTTGAATGATGATGATGATGTTTATTCTGTTGGCTTGATCATTCTTGAAGCGCTTCTTGGATCATCATATTCAGAAAAAGGAGAAATGTTTTTTCTGAATCAATTGGATAAATTTGGCAATGAAGAGGAGAGTAATCGCATAATTGATCCAGTCATAATGAGTGCTTGCTCTCAAGAATCGATATCAATAGTAACATCCATAATGAACAAATGTTTAGCTCTAGAAGCATCCGCTCGTCCTTCTATCGAAGATGTGCTTTGGAATTTGCAATATGCTTCTCAAGTGCAAGCGACAGCTGATGGAGATGTAAGAACTGAACCCAGTCCTCAGGCATAA

Protein

Gene

>AfisC4G05610
CGCACAGCATCATTAATGGCAGTATTAAAAGCTGAAATAGTCTTCAATTTTTTTGTAAGCTTTTATTGCTTTGCATAACTCTCTCTTTCTCAATAAAAACTTCACTTATGTTATGTCCTTCTTGACAAAGAAGATCTATATGCATTTTAGGTCTCTTGGGTGCTCTTCATTTTCATGAATGTTGTAACGTCTCATTCTTTACACAAAATTTTGCAGCATTCCTTTACTGGGTTTGTTTATTTGCGTCTACTTATGCTTATTTCGTGAAAAAAAAAATATTTACTGGGTTTGAATGTTTTTAGTATAATTGCAGTATTAAATGGCACGGTTCTTGGAAATAATTATTGTGGGTTTATGTTGCTTTTTCATTCAAAGCAGTCAGCAACTTTCATCATCACAAACACAAGTTTTGTATCAATTAAGGAAGCAATTAGAATATCCGAAACTACTAGAAGCTTGGAATGATACTCATGTAGATTTTTGTTATCTACCCCCTAAGCCATTTTTAATGCTTACTTGTGAACGAAATTCAGTTACTGTGCTTAAAATTGTCGGTGATAAGATAGCTAGCCATAGCCCAAGTAACTATGGAGGATATTCAATTGAAGAACGCACACTATCACAAAGCTTTTCAGTCCATTCATTTGTGACAACCTTGACTAGGCTTCCTAGTTTGAAAGTATTGATTCTGGTTTCTTTAGGGATATGGGGCCCCCTCCCAGAGAAGATTCGTCGTTTAAATTCACTTGAAGTTCTTGATTTGAGCTCAAATCATCTTTATGGTAGATTACCTCCTAGATTATCTTCTATGACAAGGCTCAATACGATTACATTGGATGGGAATTATTTTAATGATACATTTCCCGGTTGGTTAAGCTCATTGACAAATTTAAAGATTGTTAGTTTGCAGAGAAATAAGTTTAGAGGATCTTTACCTCATTCGATAGGAAGTTTAAAAACTCTGACCAAGCTTTCACTTTCAAGAAATCGCATTTCAGGTAAAATCCCTGATATCGGTATGTTAACTAATTTGGAAGTCTTGGATATGAGAGATAATGATTTGAATTCTGAATTACCATCTTTGCCTATTAGTTTGGTTACAGTTTTACTGAGCAATAACTCATTGAAAGGTGAAATTCCATATCAGTATGGTGAATTGAATCGACTACAATATCTTGATATTTCTTTCAACATGTTAGAAGGAACTCCACCTTCTGTAATATTTTCATTGCCGAATATCAGCTATATAAATTTGGAGTCTAATATGCTAAGTGGCTCTCTTTCAAGAAAATTAACATGCAGCGATCAACTGGGTTTTGTTGATATATCTACCAATAGACTCAGTGGTGAACTGCCTTCTTGTTTGAGCTCTTATTCGAATAAAAGGGTTGTGAAATTTGATGGAAATTGCTTGACTGTTAATGTTAAAAATCAACATGATTTTAACTATTGCTCAGAAAATGGAATGCAGAGAAACTCTGATGTGGGAATTATGATCGCTTCTATTGTAGGAATGGTTTTTGTGTTAATATTTGTCTCGATTGTGTTAGTGGTATTCTGTAAAAGAAAATGTCAAAGAGCTATAGCAGAGCAAAGCCTGCTACCAAAATCTGTACCAGAAACTTCAGCTACAAGCTTCTCTTCTGGACTTATCGCAGATGCTGGTATGTTTTATACTACTTGGAACATATTCATTTGACATAAAAACTTCTTTTTGCTGCGCGAGTGCGTGCATACATGAACTGACAGTAGTTTTGATTAATACTTTATTTATATCATTAATGATTTCATTGTAGGATTTCTTAGATAGAAGTCGAGACAGAAAACTGTCAACGGTTTAACTTGTCATGTGCATATTATGTTCTTTTCTTTTTCATCAAAAAAAGTAGGAAAAAGAAAATTAGTAAATGTATACCTTGGGGCTCCAACCAAAGATGCTAGCTCTGCATAATTTGATTTTTTTTTTTTAATCGCTAAATTATTCGTAGTTGACATCATGTCCATGTTATCTTGCAAGAAACTTGCTTATACACCTAATACCAACTTCATTTCAGGATACATAACTGAAAATACAAATTTTGGAGCATCTATTTTGCCTACATATCGAGTATTTTCTCTTGAGGAATTAAGAGAAGCAACAAGAAATTTTGATAGTGCATCATTTATTGGAGAGGGATCCATTGGAAAGGTTTGTTAGTATTTGCAATTTTGCATTCACAAAGCCTTATACTTTCTTAAGAAAAAGGAAAGAAAAAAAAAAAATCAGTTTCTCCTTGTTAAATGTTTTTGCAGCTATACAAAGGAAGACTAGAGAATGGGACATACATTGCTATAAGATGTTTACCATTGTTTAAAAAATACTCAATCAGAAACCTAAAACTTCGTTTGGATTTGCTTTCAAAGCTTAGACATCCAAATTTAGTTTGTCTCTTGGGCCATTGCATCGATTCTTCACAAGATGATTCAAGCGTTAACACCATCTTTCTAGTATATGAACATGTGCCTAATAGAAATTTCAAGGCTCACTTGTCAGGTAAGTACACAAAAACATATTATTCTTGGATTGATTTGTCTAGTAGTCCTTCAATAAAACTTTGATCAGAAAATTATAAGCCGACTTTTTGGTGAATTATCTTTATTTTTACCACAGAAAAAATATATTGTTTTTTCCTGAAATTTTTATTTTGCAGAAAATAGTCCAGAGAAGATTCTTAAGTGGAACGATAGGCTAACTGTTCTAATATGTATCGCGAAAGCTGTGCACTTTTTACACACTGGAATTATTCCTGGTTTCTTCAGTAATCGGATTAAAAGCAGCAGTATTTTGCTGGATGAGCACAACATAACAAAAGTTAGTGACTATGGGTTGTCAATTATTTCAGAAGAAATTTACAAACAAGTGGTATATTCAGTGTTTGAGGAGCTCAAATTTGAATGTTTTTCCCCTACTTCATGCATTGTTAATTGTTTAGCGATAATCATGATTCTCTTACTGTAGGCAAAAGGTGAAAACCAGAAAGCTATCCGAAGTAAAGCTGCAGCGAAGTGAGCACTTTCTCTAGGTCTATAATTTTTTAATCTCTTACAATGCATCTATTATTTATTGTGCCTAGCAAATTTATACTTACAGAGAGAACATAAACTTGAATGATGATGATGATGTTTATTCTGTTGGCTTGATCATTCTTGAAGCGCTTCTTGGATCATCATATTCAGAAAAAGGAGAAATGTTTTTTCTGAATCAATTGGTAAAATTTTGATTTCTTTGTTGATCCATTTATTTGCTGCTATACTGCTTTTACATTAAACACAGTGAAAGAACCAATGAACTTTGACCCTTTATTTATTTTTTAATTCTTCTTCATATTAGCAAAAGCAGAAGAAAATAAGAAACATGGTTAAGTTGTCAAAATTTTATGCAAGAGATAAGAATGATACATGAAAATGCTATTCCCATTCATCTTCTATCATCTGACATTATTCTTTGTTGTAAAACCTAAGGATAAATTTGGCAATGAAGAGGAGAGTAATCGCATAATTGATCCAGTCATAATGAGTGCTTGCTCTCAAGAATCGATATCAATAGTAACATCCATAATGAACAAATGTTTAGCTCTAGAAGCATCCGCTCGTCCTTCTATCGAAGATGTGCTTTGGAATTTGCAATATGCTTCTCAAGTGCAAGCGACAGCTGATGGAGATGTAAGAACTGAACCCAGTCCTCAGGCATAAGTTAGGATGCTCGTTCAGGCAAAAGAGAAATTGAGATAGAGCAATATTGTGGACTATACATTGATAGCTCTTTTCTATCTAGTGTCCTGTTACGTTGAATGTTTTGTTCTCTTTTTTGACAATATGATAAAGTATTTACTATGTAGCTAAGGAATCAACAGGCAGAATAAAATGTACAAGCAAATTTATATAAGATCTCCTTTTGTTTTACTTCTATAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251894.1	9.1e-194	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
Swissprot	Q8LFN2.1	1.7e-83	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
trEMBL	A0A5P1FT90	4.9e-189	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G14210.1	50.78	0.0	741		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05610	AT5G14210.1	770	356	10	15	772	16	774	50.78	0.0	741
AfisC4G05610	AT3G03770.2	735	402	11	40	760	43	755	40.41	7e-148	521
AfisC4G05610	AT3G03770.1	735	402	11	40	760	43	755	40.41	7e-148	521

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	166	225	34.3	1.3e-08
PF07714.14	Pkinase_Tyr	Domain	485	750	76.2	2.2e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001558	P	regulation of cell growth
GO:0004674	F	protein serine/threonine kinase activity
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0009723	P	response to ethylene
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009741	P	response to brassinosteroid
GO:0009826	P	unidimensional cell growth
GO:0009856	P	pollination
GO:0043167	F	ion binding
GO:0044444	C	cytoplasmic part
GO:0048364	P	root development
GO:0048468	P	cell development
GO:0048523	P	negative regulation of cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network