result

Gene information

Detail information of AfisC4G05703

Location

Gene	Chr	Start	End	Strand
AfisC4G05703	chr4	1049907443	1049912282	+

Sequences

CDS

>AfisC4G05703
ATGAAGAAGTTTTCATTCATGAAACAAAAGATATGCCGAAGCAAAACAGTAAAAGCACAGAGGAGTTTGTCTTTAGGAGACTATAAAAAGGCGCTGTCATGGTCAAAATACTTGGTTTCAAATGGAGGCGAAATTAAGGAAGGAGGCGAAGAGGAGTGGAGTGCAGATATGTCTGAATTGTTGATTGGCAATAAATTTGCCGCTGGAAGGCATAGTAGGATATATCATGGAATTTATAAGGAGAAAGAGGTTGCGATTAAGTTGATTAGTCAACCAGAGGAGGATGCAGTTTTAGCGGGGTTGCTTGAGCAGCAGTTCAATTCTGAGGTTGCGCTTCTCTTGAGATTGCGGCATCCTAATATCATTAGGTTTATAGCAGCATGCAAAAAACCACCTGTTTTCTGTATAATCACAGAGTACATGGATGGTGGCTCTCTCCACAAATTTCTTCATAATCAAGAGCCTCACTCTGTTCCACATAAACTAGTACTGAAACTAGCACTTGAAATTGCCCATGGAATGAACTACCTTCATTCCGAAGGAATTCTTCATCGTGATCTGAAGTCCGAAAACATATTACTTGGCGAGGACTTATCCGTAAAAGTGGCAGATTTCGGAATCTCATGCTTAGAATCTCAGTGTGGTAGTGGAAAAGGATTCACAAGCACTTATAGATGGATGGCTCCAGAAATGATCAAGGAGAAAAATCATACAAGAAAAGTCGATGTTTATAGCTTTGGTATGGTTTTATGGGAGTTACTCACTGCTTTAATCCCTTTTCATGACATGACACCTGAACAGGCCGCCTTTGCTGTAGCACAAAAGAATGCTAGACCGCCTCTGCCCGATTCATGTCCAGCAGCATTTAGGCATCTAATCAACCAATGCTGGTCGACAAATCCTGATAAAAGGCCACAGTTTGAAGAGATAGTATCACTGCTAGAATATTATCAGGACTCGTTTGATGAAGACCCTTCATTTTTCTCATGGTATGAACCCATTCAGAATCAGGCTCTAGTTCGATGTTTCTCAAAGTGCATTTCTCTTCGCAGCTCTGCATCGCTTGAACCATGA

Protein

Gene

>AfisC4G05703
GTTCTCCCATAAACTGCCTTTCATCCATCTTTCTTTTTTCACTCTATCATTTTCTCTGAAATTCTAACCCTAATCTCATTCCTCAACTTTTCGTATTCTTTTCCTTTTCGTTTTTCTTCGTTGGCTTGTACGACGTTTTCATGATTTTATGCTCCGATCTGTTAGCTGACAAAAATTTCAAATATTTTATGGTGACATATCAAAATTTTCGATTTGGTGAAATGTAGGTGAAACAATAAGCTTTATCACTTAAAAATCTGATCTTTATGCATTTAAGCTTGCGAATTTTCATGCAATTTGAGATCCTTTTCGATATACTGGAGGTTTGGTAAAATTTGAATCTCAAAACCAGAAGAGATCTTGTCTGTTTTACGTGTTTACACAAATGAAGAAGTTTTCATTCATGAAACAAAAGATATGCCGAAGCAAAACAGTAAAAGCACAGAGGAGTTTGTCTTTAGGAGACTATAAAAAGGCGCTGTCATGGTCAAAATACTTGGTTTCAAATGGAGGCGAAATTAAGGAAGGAGGCGAAGAGGAGTGGAGTGCAGATATGTCTGAATTGTTGATTGGCAATAAATTTGCCGCTGGAAGGCATAGTAGGATATATCATGGAATTTATAAGGAGAAAGAGGTTGCGATTAAGTTGATTAGTCAACCAGAGGAGGATGCAGTTTTAGCGGGGTTGCTTGAGCAGCAGTTCAATTCTGAGGTTGCGCTTCTCTTGAGATTGCGGCATCCTAATATCATTAGGGTAAAATTCTTAACTTTTGATTTTGGTTTTGCATGTGACACGTTTGATGTTTTTTATTTAGTAAAATTGGATATTAATCAGCTGCTGTTCTATGTGTTTTGATTAGATGCCTTAGGTTAGTAACATAAGGTCATGAAACATTAATTAGGAAGTATGTACCTGCAATCATCATCAAGTTTGACTATTCAATTAACATATTTACGCATGCTTTATTGCTTTTTATAGTAGTTTTTGTTTTAAATCCAGAAGCTACAAAAACTACAATCAGGCTTCGTAAGATTTTTCAAAGCATACAAAAACAAACATGCACTTGGTTTACAAAAATTATATGATCCGTTTAGGGAATCATACCCCAAAATCATCTTGATGTTTGTAGATGATATTTGTTATGTTACCACAATGACACAGATCTTGAAAAGTATTGGTTACTTTGCTTGAATTAAAGTAGGATACTATGCCTTGCCTATGGCAGTTCTTTTCTTTTCTTTTCTTTTTAATGGAGAAATGTTATCTGATAACATGTACACTGTTAATATTTTCTAGGAATAAATATATGATTTAATCACATATCTTTATTAATAGTTGAAATAGAAACATAAACTTTTGATCCGACCGTGGAATTCTAAAAATACCATTATATATGTAAACAAGAGTTCGAATTCCACATAGAACAAATATTAACATCTATTTTTAAATGTAAATTTGATGTGTAAATAATGTTACAAGTTCGAAACTATGTTCCAACAAAAAAATTATAATAATTTTCCTTGTATTTTTCATTTTACTTTTATCAAAATATACTTATAAATTTTAAATTTTATGATTTTATAAGAATTTTTTATATGCATGTGCGTTGCACGTGCCCTAAAATCTCGTACAAAAAATTTAGCTACTTTGTACATAATAGATTTTACGTTGACACCTGATTTTAAAATCTAGCCAATCTTTTCATCAGTTCTTAACATGAATGTATGTATGTGCGTATATACACACAATCATGATTTGAAATGGTGATTGGTGACTATTGTCCTATGTGACATTTGTTCTTGCATCTGTGGGGGAACCTTATTCAGAGAATATAACGGATCTACATTACTGTTGAGCTTTAATATTTTGTGATATATGTGCATTGAATGGACACATTTTGCATTATTTCTATGCCTTTTTTCTTCACCTGGTAGTCTTTTTTGGGAATATTAGCTTAGTGTACAGTAAGTTCAAACTGCTATGGAACTGAAAGAATGTACAATTAGAACTGACACAATATATGTTGGCCGTTGGATATTTATTTTACATGCAAGGTTGAGTTCATAGGAAGATCTAATGATTGAGATCTATCGTGTCATCGTTGTGCTCAAATGGAATTTCCATATGTTATATTTTATAACTTTTTATCAAAATTATCTGTTAGGATCTGATTTATTGAAATCGAGGGAGAATGAAGATGTAAAATTCATAACATAATTATAGTATATAGAATGGAAAGTGGAATAAAAAATAACCACACATTCAACATCATGGCATCTAATTTGGATGCTAAATTTGTGAAAAGCTGAGAGATGGCCATCAAGCCACACTGGAGAGTTTGACTGGTAGCAAAGATGATACTAGTTAGAAGAAGCTGTCTACAATTCAAATTTCAATGGAAATTAAGATGAAGTGATGGGATGGATAATCTACATGATTAGATTAGTGATTACATACTAATGCATGTTCATAAATTCTAAAAGTGTATTAATGAAGCAACAACACTAGTAAAAAAGGAAATATAGAGAGAAGAGTTCATGCAGTTAGAATTTGAGTGCATCTACATGCATAGTCCAAAGATATAGATAGCAATGTTGCAAAAATTGTTCATGCTCTTCTAGTGAATTTGGATTAAATTTGCCTTCGATGTTGATTAACATAGAAGACCTTAGTTATAATAACATTTGGCGTAGGACAATATTATTATATTTGATGATGTAGTGCATAATGTTGCAAGTCGTGATTATAAAACTAATACGATGTTAAATATACACACAACTTGGATTAAAAAAATTAGAAATAAAAAATTGGAGTAATAAAGTACGAGCAGTTTTTGACTAAAATATAACCTTAGTTTTACTTAATAAGCACTTGAATCTCTTTGTATCATTGTGACGGTCCCCATCTCCACTTATGTTGCTGCCTTAACTTTTGAATATACTAAGGTTCTTGATTTAGTATCAAGGACAATGATACATAAAGAGGAATCTCATACTTGATACCCTTGTTTATCCTGTCGACTAATAAAACCTCTATAGTATAAAAAAAACAAAAAAAAACCATGCTTTTCCCAATGCTTGTGGAACATCATAATTATCATTGTAATGTATATCATGCTTTGATGCTTTGATTATTATCAAACCAACTGAAAAGGGTATTGTATTGTAATAAATTTGAAGAGCAAAACCTCACCCCAAACTCCATGTCTGTTGTACCAATAATATCATAGCCGTTCATTATTAATAAATTAACTAATTAGTATCAAAACAAAGTAAGAAATCAAGTGTTTGGATGTAATGGGGAAATGACCACCTCTTTGCTCATAAATTTGTCTTTTCAAAAATTCTTATGATCTCAAGAATGAAAGTGATGAATATGCAACATAATTAACTACACTATGTCCAAGCCCTGAAGCTCTTATAATTAAGAACATAATTAAGAACACTAATCATGATAATGCAGCATAATCAGTACTGAACTTATACGAGAATCATGAGTATATTAACTTGATTATGCAACGATTAATCATCAATGTTAAATTTCCAGTTCTTGAACTGGAGGGGTTATTTTTCTTTGTAATATGTTCTCATTTAAACAAAACTCTCATTTATATATGTTGAATTAATAAAGTTCTGTGCCTTAAAGTATCGTTAATATTTTTTTTGTTTGTATTGTAAATTGTTTTGAACACTGCTATTCTGTTCTTGTAATCACACCGAGCCTACCAGTTCTAGAGTCGGACTCATGTGTTATATTTCTTTTCTTTACAGTTTATAGCAGCATGCAAAAAACCACCTGTTTTCTGTATAATCACAGAGTACATGGATGGTGGCTCTCTCCACAAATTTCTTCATAATCAAGAGCCTCACTCTGTTCCACATAAACTAGTACTGAAACTAGCACTTGAAATTGCCCATGGAATGAACTACCTTCATTCCGAAGGAATTCTTCATCGTGATCTGAAGTCCGAAAACATATTACTTGGCGAGGACTTATCCGTAAAAGTGGCAGATTTCGGAATCTCATGCTTAGAATCTCAGTGTGGTAGTGGAAAAGGATTCACAAGCACTTATAGATGGATGGCTCCAGAAATGATCAAGGAGAAAAATCATACAAGAAAAGTCGATGTTTATAGCTTTGGTATGGTTTTATGGGAGTTACTCACTGCTTTAATCCCTTTTCATGACATGACACCTGAACAGGCCGCCTTTGCTGTAGCACAAAAGGTACCGATGATTTCAATACTTTTTTAAACATCTTTCTTTTGTGATAAGTAGCTTTTAAGCAGCAGTACTTTTAACATGTCGTTTTGTATACGTGTAGAATGCTAGACCGCCTCTGCCCGATTCATGTCCAGCAGCATTTAGGCATCTAATCAACCAATGCTGGTCGACAAATCCTGATAAAAGGCCACAGTTTGAAGAGATAGTATCACTGCTAGAATATTATCAGGACTCGTTTGATGAAGACCCTTCATTTTTCTCATGGTATGAACCCATTCAGAATCAGGCTCTAGTTCGATGTTTCTCAAAGTGCATTTCTCTTCGCAGCTCTGCATCGCTTGAACCATGACATTGATTTATTTTAAGAACTAATATGTAAATGCTTTATTTGTAATGTCGTTATAATGTCTATGCCAGCCTTACCTTAATTGGGTTGATGGCGTGGTAGATATTAATATTCTTAGAAGATGATTTGGCCTTTGTAAGATCTTATATTTGCTCTGCTTTGTTTATTTGGAATGCTTCTGATCTCTTGGGGTTTTTTTAGCCAATGTGATCTTTTGGGCAGTTCAAGCAAATTGCTGTAATACTCCTAATGAATGTAATTTTCTTGTCG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251611.1	5.4e-173	serine/threonine-protein kinase HT1-like
Swissprot	Q2MHE4.1	4.8e-102	High leaf temperature protein 1
trEMBL	A0A5P1FWJ5	3.9e-173	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G62400.1	62.24	1e-107	386	HT1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05703	AT1G62400.1	294	108	1	33	323	11	304	62.24	1e-107	386
AfisC4G05703	AT5G58950.1	299	143	2	29	324	175	473	51.17	5e-89	324
AfisC4G05703	AT4G31170.3	265	135	0	51	315	122	386	49.06	3e-77	285

Ortholog group

Species	Genes
Allium cepa	g262541.t1
Allium fistulosum	AfisC4G05703
Allium sativum	Asa5G04706.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g01740.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	62	314	219.6	3.8e-65

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000165	P	MAPK cascade
GO:0005515	F	protein binding
GO:0002229	P	defense response to oomycetes
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005783	C	endoplasmic reticulum
GO:0005730	C	nucleolus
GO:0005769	C	early endosome
GO:0005802	C	trans-Golgi network
GO:0008219	P	cell death
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009658	P	chloroplast organization
GO:0009723	P	response to ethylene
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0010182	P	sugar mediated signaling pathway
GO:0012510	C	trans-Golgi network transport vesicle membrane
GO:0018193	P	peptidyl-amino acid modification
GO:0043005	C	neuron projection
GO:0033554	P	cellular response to stress
GO:0046777	P	protein autophosphorylation
GO:1900150	P	regulation of defense response to fungus
GO:1900424	P	regulation of defense response to bacterium
GO:2000031	P	regulation of salicylic acid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network