Detail information of AfisC4G05717
| Gene | Chr | Start | End | Strand |
|---|
| AfisC4G05717 | chr4 | 1051730367 | 1051741015 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020253770.1 | 8.0e-149 | zinc finger CCCH domain-containing protein 16 |
| Swissprot | Q9SY74.2 | 7.1e-126 | Zinc finger CCCH domain-containing protein 5 |
| trEMBL | A0A5P1FG69 | 5.8e-149 | Zinc finger CCCH domain-containing protein 5-like |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT1G10320.1 | 63.66 | 1e-154 | 543 | | Zinc finger C-x8-C-x5-C-x3-H type family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC4G05717 | AT1G10320.1 | 421 | 128 | 6 | 30 | 429 | 34 | 450 | 63.66 | 1e-154 | 543 |
| AfisC4G05717 | AT5G42820.1 | 167 | 95 | 2 | 212 | 376 | 9 | 172 | 40.12 | 8e-32 | 135 |
| AfisC4G05717 | AT5G42820.2 | 167 | 95 | 2 | 212 | 376 | 9 | 172 | 40.12 | 8e-32 | 135 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00642.21 | zf-CCCH | Family | 220 | 240 | 23.5 | 3.4e-05 |
| PF00076.19 | RRM_1 | Domain | 284 | 340 | 25.4 | 8.4e-06 |
| PF00642.21 | zf-CCCH | Family | 350 | 377 | 26.0 | 5.6e-06 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K12836 | U2AF1; splicing factor U2AF 35 kDa subunit | EC:- | Spliceosome | ko03040 |