Detail information of AfisC4G05747


Location
GeneChrStartEndStrand
AfisC4G05747chr410583719761058375764-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009388384.21.2e-119PREDICTED: protein MONOCULM 1
SwissprotQ9ZWC5.13.2e-80Protein LATERAL SUPPRESSOR
trEMBLA0A804IB018.9e-120(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G55580.144.912e-80 296LAS;SCL18GRAS family transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag60404.t1
Allium fistulosumAfisC4G05747
Allium sativumAsa5G04742.1
Arabidopsis thalianaAT1G55580.1
Oryza sativaLOC_Os02g10360.1; LOC_Os06g40780.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03514.11GRASFamily15359333.61.3e-99

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009723Presponse to ethylene
GO:0009737Presponse to abscisic acid
GO:0009863Psalicylic acid mediated signaling pathway
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009938Pnegative regulation of gibberellic acid mediated signaling pathway
GO:0010014Pmeristem initiation
GO:0010223Psecondary shoot formation
GO:0042538Phyperosmotic salinity response
GO:0044763Psingle-organism cellular process
GO:2000377Pregulation of reactive oxygen species metabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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