Gene information

Detail information of AfisC4G05832

Location

Gene	Chr	Start	End	Strand
AfisC4G05832	chr4	1070795833	1070796506	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	RWV83585.1	1.0e-35	hypothetical protein GW17_00054783
Swissprot	O22174.1	7.2e-34	Ethylene-responsive transcription factor ERF008
trEMBL	A0A444CCI9	7.4e-36	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23340.1	55.17	1e-36	148	DEAR3	DREB and EAR motif protein 3

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05832	AT2G23340.1	145	47	3	27	154	26	169	55.17	1e-36	148
AfisC4G05832	AT5G67190.1	100	26	2	22	121	14	109	70.00	1e-33	138
AfisC4G05832	AT3G50260.1	137	45	4	26	152	18	148	55.47	2e-33	137

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	29	77	38.2	1.2e-09

Gene Ontology

Accession	Ontology	Name
GO:0001944	P	vasculature development
GO:0002213	P	defense response to insect
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009834	P	plant-type secondary cell wall biogenesis
GO:0009873	P	ethylene-activated signaling pathway
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0010941	P	regulation of cell death
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0034605	P	cellular response to heat
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network