result

Gene information

Detail information of AfisC4G05880

Location

Gene	Chr	Start	End	Strand
AfisC4G05880	chr4	1080964477	1080968131	+

Sequences

CDS

>AfisC4G05880
ATGAAGAATGGTTTGGATTTACATTTGATTTTCAAACTCTTGTTCTTTCTAGAATTCACAGCTCTCGCAAATGGAAGAGACATTGCATTGCCTTCCCCTTTCTCTCCTCCTGCTCCCTCTCCTCATTTCCACTCTATATCATCGCCGCCTCATGCAATGCAGATAGTTGTAATATACAATCACTCACATATTCAGAAAGAATTAGTGTTAGCCATTGTTCTATCTTCAGTAGCAATCACTCTAATCATGCTATCTGCTTCCTTCACTTGGATTTTTTGTCTAAGTAATCGAAGTCGAACCAACTCCAAACACAATCAAGGTTCAGATTCAAGTGGAGAAGTCATATTTGGTCCTAATTCAAGCAAATTCAATTCATTTAAACCAACCGGCAGAAAAAATGCTCTTGCGGTGATAGAGTACTCAGTGTTAGAGTCAGCAACAAATAACTTCAACGACAGTAACATTATAGGACAAGGAGGATTTGGGTTTGTGTATAAAGCTTGTTTCGGTGAAGGCGTTTTTGCTGCTGTGAAGAAACTAGATGGCAGTAGTCAATACTGTGAAAGTGAATTTGAGAATGAGGTTGATTTGTTGGGAAAGATACACCATCCAAATATTATTACTTTGTTGGGATATTGCGTTCACGAAGATATAAGATTCCTTGTATATGAGTTAATGCATAATGGTTCTCTTGAAAGTCAATTGTATGGGCCATCTAATGGGTCGGCCTTAACTTGGCATATGCGAATGAAAATAGCTCTGGATGTAGCAAGAGGATTAGAACATCTTCATGAGAATTGTAGCCCAACTGTGATACATAGGGATCTAAAGTCATCTAATATCCTTCTGGATTCAGAATTCAAGTCCAAGATATCAGATTTTGGACTTGCAGTAAGTAAATGTAACCAAACAAAGGGCGAACTCAAACTCTCAGGCACTCTTGGTTATGTAGCGCCTGAGTACCTTCTTGACGGTAAATTAACCGAAAAAAGCGACGTGTATGCATTTGGTGTAGTTCTGCTAGAGCTTCTAACAGGAAGAAAACCAGTAGAAAAATTGTCACCAACTCAATGTCAAACTATAGTCTCCTGGGCTATTCCTCAGCTCACTGATAGAGCAAAATTGCCCACCTTAGTGGACCCAGCAATAAAAAATACTATGGACTTAAAACACTTGTACCAAGTGGCTGCCGTGGCTGTTTTGTGCGTTCAACCAGAACCAAGTTATCGACCTCTTATAACCGATGTTCTTCATTCGTTAGTTCCATTAGTACCTTTAGAGCTTGGAGGAACTCTGAGAATTTCCGACTACGGAAAGCCAAACATCAACTTACAGCAAAAGCTTTGA

Protein

Gene

>AfisC4G05880
TTCCTGTTGGTGTCCTTGTCTTGCTCCTTTATATTTGAACCGAATCATTAAATGCAATATTTTAAAACAAATTTAAGCAGAAAAGCCACTAGTAAAAACAAAGGCGAAAGTTCCCATTCAAATAACTATTGCTAGAATGAAGAATGGTTTGGATTTACATTTGATTTTCAAACTCTTGTTCTTTCTAGAATTCACAGCTCTCGCAAATGGAAGAGACATTGCATTGCCTTCCCCTTTCTCTCCTCCTGCTCCCTCTCCTCATTTCCACTCTATATCATCGCCGCCTCATGGTACTTTTTTTAGATTTTTAATTTAGAAATACATCGTCGATCTATTAATTAACTAGTTTTGCTTTCTGGGTTTCGTTCTTTTGCTTTTCTTGCATCATTGTAGCCAGTCAAAATCGAATCTTTGAAACATCTTTTTCTTCCACATTTTTTGCTGTGGTTTAAGTTTTTTTCTTTAAAAGTGTACAAAATTGAGCTTAGGATTTGATTTACTTTCTAAGTTATGCTCTTTTGAATATAAAGACAGTTCCGGTGCATTCGGATTTGTCTTAGTTTAATCAAATTGTTATTTCGATTTGCTACTTTTGCTTTTTTCAATCACTGTATTTGGTCAACAGTTTGATTCTTTATTGTTACTAATATGTTTACATTGTGTACCCAGAAAATCTATCTCCATTTATTCAATTGATTTCATTAGCTATACCTACAATTGCTACTTTCATCTGATCACCGTAATTTCACATTTGATATTTAATTCGATGTTTGCTTTTTCAGCAATGCAGATAGTTGTAATATACAATCACTCACATATTCAGAAAGAATTAGTGTTAGCCATTGTTCTATCTTCAGTAGCAATCACTCTAATCATGCTATCTGCTTCCTTCACTTGGATTTTTTGTCTAAGTAATCGAAGTCGAACCAACTCCAAACACAATCAAGGTTCAGGTAATCTCTTTTAACATAAATTATCACATACTATATAATGTATCTTTAATGCTTAATTGTATAGTATAATTTATGCAGATTCAAGTGGAGAAGTCATATTTGGTCCTAATTCAAGCAAATTCAATTCATTTAAACCAACCGGCAGAAAAAATGCTCTTGCGGTGATAGAGTACTCAGTGTTAGAGTCAGCAACAAATAACTTCAACGACAGTAACATTATAGGACAAGGAGGATTTGGGTTTGTGTATAAAGCTTGTTTCGGTGAAGGCGTTTTTGCTGCTGTGAAGAAACTAGATGGCAGTAGTCAATACTGTGAAAGTGAATTTGAGGTAATTTTTGAAAAACAAATTCAGTTGCAATCATGTTGCTTACATTGCAAAACATTACATTTTGTGAAACAGTTTTGCACTTGAGCTTATACTTAGAATCAATATGCAGAATGAGGTTGATTTGTTGGGAAAGATACACCATCCAAATATTATTACTTTGTTGGGATATTGCGTTCACGAAGATATAAGATTCCTTGTATATGAGTTAATGCATAATGGTTCTCTTGAAAGTCAATTGTATGGTATGTGCTTTTCTCTAATTTAAATTTTCCTAGAGTTTGAATCATCTGTTCTAACAAGGCAAATGTTCAACCATGGTCTGGATCTTCTGGAATTTTAGATGGAACATCTGATAGTCCATATCAAACCATGCAACTTACTTGGTTTTTAGCTACGGAGTGGGTGATCCAATTCCAATTTCCTGGAAAGGGAGATTCACTCTGTTATAATAAAGAAAAAGATAGAAGTTCTCATATCATAAGTAGGGTTAAGCTCATTTAACATCAATTTATTTTAATCGTATATTAGAAGGAGTTTTGAACAGTAACTATTAAGAGTTTTGAGTAAATAGTAACAGATAAAAGTATTTGTATAGAAAGTTGAAACCATAACAAAATTTAGTTGGAAATTTTGCAACAAGTCATAACCAAGTACTTTTTTTAATGACTTTTCGACTTATTTGTTAAGATAAAAAATTGAATTGTTGGCAGTTACATCAGATTATAAAAGTAACCTTAAGATACTTTTGATGTTTATAAGCTATTTACCAAACAGCCTCATAGATAGTTGAGGTTTGAGCTTCTCAACTTTGTGTTATAACATAAAAGATATGCATAGTAACAAATTCTTATTTTGCATATCCTAAACATTTTTTAAAAAAAATTAATTTTTTTTAACATTACTTCTGGTGTTTCTGTAGGGCCATCTAATGGGTCGGCCTTAACTTGGCATATGCGAATGAAAATAGCTCTGGATGTAGCAAGGTTATCACCTGATATAATTACCTATATATTAGCTGTTGTGAGACATGCTTCCTATGTATTGAATCAAAATTTCTCTGTTATATACTATGTAGAGGATTAGAACATCTTCATGAGAATTGTAGCCCAACTGTGATACATAGGGATCTAAAGTCATCTAATATCCTTCTGGATTCAGAATTCAAGTCCAAGGTTCGTTCACTTGGTAACATTACTACTTCAAAGTTTGAAATCCCTGGTATATTAACACTTCCTTTTTCATACAGATATCAGATTTTGGACTTGCAGTAAGTAAATGTAACCAAACAAAGGGCGAACTCAAACTCTCAGGCACTCTTGGTTATGTAGCGCCTGAGTACCTTCTTGACGGTTGGTAACCCTTTATATTTTGACATTATCTTGCAACACTTCTTCATTGACCATATGTACTTAAATGTTTATCAGGTAAATTAACCGAAAAAAGCGACGTGTATGCATTTGGTGTAGTTCTGCTAGAGCTTCTAACAGGAAGAAAACCAGTAGAAAAATTGTCACCAACTCAATGTCAAACTATAGTCTCCTGGGTATGCTGTAAAACTTGTTATAAACTATGCCTTTTACATTTGCACTTACCTGAAAAGTTCACAATTTTCATTGATACAGTTCAATAATAAGACTGTTTTGTATTCTTCAGGCTATTCCTCAGCTCACTGATAGAGCAAAATTGCCCACCTTAGTGGACCCAGCAATAAAAAATACTATGGACTTAAAACACTTGTACCAAGTAAGTTGCTATTTTAGTAAATCTGCATGTCATTTAATTGAATATTTTGCTATCCACCCATTAAGAAATTTCAGCATGTTTCATTGTACTAATACGAACTTGACATAATTTTGTGCCACCATCAATACAGCATTCTTCAGATTATCATGGACATGGAATAGCTCTATGTCATAACTAAGCAAAATGTAAAAATTTGAAAAATAATATTTTTGTAGTTTAGAAGAGTTGGATATCATTTTGGTCATATTTTGTAGTATAACATATATCAAAGGGTGGTATAAACAATAATAGGCTAACTTTGAATTTAGTTTAAGATATTTTTGGTTACGTCTAATACTTGGAAGTAAATGTGGGTACATATAGGTGGCTGCCGTGGCTGTTTTGTGCGTTCAACCAGAACCAAGTTATCGACCTCTTATAACCGATGTTCTTCATTCGTTAGTTCCATTAGTACCTTTAGAGCTTGGAGGAACTCTGAGAATTTCCGACTACGGAAAGCCAAACATCAACTTACAGCAAAAGCTTTGAACTGCTTAAACTTGAACTAGTTGTAGTGTTATTTTCTGTATTTCTTTAAAATTTTCCACGTATTGTACTTTTCTCCAAAGAAATCAGTTCATATTGTTTAAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK70408.1	4.4e-172	uncharacterized protein A4U43_C05F33400
Swissprot	Q0V7T5.1	1.1e-108	Probable receptor-like protein kinase At1g80640
trEMBL	A0A5P1EWD5	3.1e-172	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32000.2	59.71	4e-132	468		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05880	AT4G32000.2	407	146	3	29	434	25	414	59.71	4e-132	468
AfisC4G05880	AT4G32000.1	407	143	4	29	434	25	413	60.20	2e-131	466
AfisC4G05880	AT2G25220.1	374	133	2	66	435	44	413	62.30	5e-128	454

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	151	418	160.9	3.4e-47

Gene Ontology

Accession	Ontology	Name
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004674	F	protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0009506	C	plasmodesma
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010068	P	protoderm histogenesis
GO:0010183	P	pollen tube guidance
GO:0019901	F	protein kinase binding
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network