Detail information of AfisC4G06162


Location
GeneChrStartEndStrand
AfisC4G06162chr411377125561137723201-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010916159.11.6e-208serine/threonine-protein kinase prpf4B
SwissprotQ13523.36.2e-109PRP4 pre-mRNA-processing factor 4 homolog
trEMBLA0A6I9QW311.1e-208non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G25840.151.550.0 721Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain620934162.98.3e-48

Gene Ontology
AccessionOntologyName
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0000398PmRNA splicing, via spliceosome
GO:0006915Papoptotic process
GO:0004672Fprotein kinase activity
GO:0008104Pprotein localization
GO:0046872Fmetal ion binding
GO:0005654Cnucleoplasm
GO:0005694Cchromosome
GO:0006468Pprotein phosphorylation
GO:0006974Pcellular response to DNA damage stimulus
GO:0006996Porganelle organization
GO:0009880Pembryonic pattern specification
GO:0015630Cmicrotubule cytoskeleton
GO:0018193Ppeptidyl-amino acid modification
GO:0019953Psexual reproduction
GO:0022402Pcell cycle process
GO:0030154Pcell differentiation
GO:0031325Ppositive regulation of cellular metabolic process
GO:0044430Ccytoskeletal part
GO:0044444Ccytoplasmic part
GO:0044702Psingle organism reproductive process
GO:0044822Fpoly(A) RNA binding
GO:0045732Ppositive regulation of protein catabolic process
GO:0048513Panimal organ development
GO:0051649Pestablishment of localization in cell
GO:0071013Ccatalytic step 2 spliceosome
GO:0072331Psignal transduction by p53 class mediator

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08827PRPF4B; serine/threonine-protein kinase PRP4EC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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