Detail information of AfisC4G06439


Location
GeneChrStartEndStrand
AfisC4G06439chr411997408311199748701+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008798862.18.5e-206serine/threonine-protein kinase Nek5
SwissprotQ94CU5.18.3e-190OsNek5
trEMBLA0A8B7CGW58.0e-206serine/threonine-protein kinase Nek5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G44200.158.493e-167 585ATNEK6;IBO1;NEK6NIMA (never in mitosis, gene A)-related 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag79255.t1
Allium fistulosumAfisC4G06439
Allium sativumAsa0G03970.1
Arabidopsis thalianaAT3G44200.1; AT3G63280.1; AT3G63280.2
Oryza sativaLOC_Os01g64490.1; LOC_Os05g36960.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain8262221.61e-65

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0000242Cpericentriolar material
GO:0000278Pmitotic cell cycle
GO:0004674Fprotein serine/threonine kinase activity
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006468Pprotein phosphorylation
GO:0009913Pepidermal cell differentiation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0030145Fmanganese ion binding
GO:0042995Ccell projection
GO:0043622Pcortical microtubule organization
GO:0055028Ccortical microtubule
GO:1900062Pregulation of replicative cell aging
GO:2000772Pregulation of cellular senescence
GO:2001020Pregulation of response to DNA damage stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08857NEK1_4_5; NIMA (never in mitosis gene a)-related kinase 1/4/5EC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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