result

Gene information

Detail information of AfisC4G06511

Location

Gene	Chr	Start	End	Strand
AfisC4G06511	chr4	1213364861	1213371624	-

Sequences

CDS

>AfisC4G06511
ATGGGCAACACATGCCAAGGTTCTGGAACCGATAAATACTTGAATCTTTCCCAACCAGCTTCAAAAAACAGCACAAACACAAATCCCACATCGACAACAAACTCATCAAAAACCTCAAACTCATCAGATCCCGATCAATTTCCAGAACGCCCGCCAAAGACAAAACCCATCATGAGAAGACAGATCGATTCAGGCGCGATTTCAGTTCTAGGTCATCAGACCCCCAACATTCGAGATTACTACGTTCTAGGCAGAAAATTAGGGCAAGGGCAGTTCGGCACTACTTACTTGTGCACTGAAACTGCAACCAATATAGATTATGCTTGCAAATCTATATCGAAAAGGAAGCTTCTTGTACAAGAGGATATAGATGATGTAAGGAGAGAGATACAGATAATGCACCATTTGTCTGGGCATAAGCATGTGGTTCAGATAAAAGGAGCATATGAGGATTCATTGTATGTGCACATTGTGATGGAGTTGTGCGGTGGGGGTGAGTTGTTTGATAGGATTATAGAGAGAGGGCAGTATAGTGAGAGGAAGGCGGCGGAGATTACGAAGATTATTGTTGGGGTTGTGGAAGCTTGTCATTCGCTTAATGTTATGCATAGGGATTTGAAGCCGGAGAATTTTTTGTTGGTTGATAGAGACGATGATTTGTCACTCAAGGCTATCGATTTCGGATTGTCTGTTTTCTTTAAACCTGGTCAGGTTTTCAAGGACGTAGTTGGGAGTCCATATTACGTAGCGCCTGAAGTACTACGTAAGCATTATGGACCAGAAGCTGATGTCTGGACAGCAGGAGTTATACTCTACATTCTGCTGAGTGGCGTACCGCCTTTTTGGGCAGAAACACAACAAGGGATATTTGATGCAGTATTGAAGGGAGTCATTGACTTTGATTCTGACCCATGGCCTTTGATTTCTGATAGTGCGAAAGATCTCATCAAGAAAATGCTTTGTTCTCCTCCTTCACAACGATTGACTGCTCATGAAGTATTATGTCATCCTTGGATTTGTGAAAATGGAGTTGCTCCAGACAGACCATTGGATCCAGCAGTACTATCTCGCATCAAACAGTTCTCTGCAATGAACAAGTTGAAGAAGATGGCTTTAAGAGTGATAGCAGAAAGCTTATCAGAGGAGGAGATTGCTGGACTGAGAGAAATGTTTACAGCAATGGATGCAGACAACAGTGGTGCAATTACATTTGATGAGCTCAAAGAAGGTCTCAGAAAATATGGTTCCACATTGAAAGATACTGAAATACATGATCTCATGGCAGCAGCTGATGTGGACAATAGCGGTACTATCGATTATGGGGAATTCATTACTGCAACTGTACATCTCAATAAATTGGATAGAGAGGAGCATTTGGCAGCAGCATTTGCATATTTCGACAAAGATGGTAGCGGTTATATCACTGTGGACGAGCTGCAGCAAGCTTGTAAAGAGCACAACATGGAAGATGTTCTTCTTGAGGATATTATCAGTGAAGTCGATCAAGATAATGATGGACGCATTGACTATGGGGAATTTGTTGCTATGATGCTGAAGGGAAATATGGGAGTTGGAAGAAGAACAATGAGGAACAGTTTGAATATAAGTATGAGGGATAACTTTTAA

Protein

Gene

>AfisC4G06511
ATTTGGTCCATCCTTCCTCTGTCTTCAAAAATTCCCTTTATTTTATTGCTAAACATCTGTTCGAATCAGTCAATTATTCCTGCAGCAGATCTAGCTCTCTTTCTTCTTCTCCGTTTCCTTCTCATGATTTTTCGAGCAAAGCTCGTTATCAAAGATTCAAAGTCCACTACGGATCCCTTTTTCGAATATTCTTCTCACCAAAGCAACTCCTTTGAGCTCAATAACTACGATTTTCATCTTCTATCTACTCAGTAATCCATTCTATTTACTGAAATCCGAATCTTCAAGCTCAAAACAAGCTAATTTCATCCTCCAACAATGCAATAATCACACTAAAAAGTAATCCCCTTTTTTCTTTCATGGGCAACACATGCCAAGGTTCTGGAACCGATAAATACTTGAATCTTTCCCAACCAGCTTCAAAAAACAGCACAAACACAAATCCCACATCGACAACAAACTCATCAAAAACCTCAAACTCATCAGATCCCGATCAATTTCCAGAACGCCCGCCAAAGACAAAACCCATCATGAGAAGACAGATCGATTCAGGCGCGATTTCAGTTCTAGGTCATCAGACCCCCAACATTCGAGATTACTACGTTCTAGGCAGAAAATTAGGGCAAGGGCAGTTCGGCACTACTTACTTGTGCACTGAAACTGCAACCAATATAGATTATGCTTGCAAATCTATATCGAAAAGGAAGCTTCTTGTACAAGAGGATATAGATGATGTAAGGAGAGAGATACAGATAATGCACCATTTGTCTGGGCATAAGCATGTGGTTCAGATAAAAGGAGCATATGAGGATTCATTGTATGTGCACATTGTGATGGAGTTGTGCGGTGGGGGTGAGTTGTTTGATAGGATTATAGAGAGAGGGCAGTATAGTGAGAGGAAGGCGGCGGAGATTACGAAGATTATTGTTGGGGTTGTGGAAGCTTGTCATTCGCTTAATGTTATGCATAGGGATTTGAAGCCGGAGAATTTTTTGTTGGTTGATAGAGACGATGATTTGTCACTCAAGGCTATCGATTTCGGATTGTCTGTTTTCTTTAAACCTGGTAAGAGGTTTGAATTTTAACTAGGTATAAATTTGAATATATGAATCTGCTTATGAATCTTTGAAATGGAAACAAATTTATGTTGCTGTATCTAGCAGCGCAAGCAGTTGGTATGGATATAGCAAGTTGGTCTACTATGTCATTCATATATGTAGCAATATATCTGCTAAAATATGGATTTGGGTCATATGTGATGAAAAATCATAATAGGAATACTCTAGATATTACGATCATTTTGGTTTACAGTTTACTGCATTATAGTTTTCATGGATCTGAACCGTTCGGCTGAAAATTGGTAAGGGTGCGTTTTTTCCGAAGCGAAAGTGGTCGCCGAAAGGGGTATTATGAACGGAGCATGAACAATGAAAGTTCGATGAAAGAGAATGTGATTTTGTGCAGCGAAAGAGGAACGATTGTTTGTATGAATTTGTATTTTTATTTATTTTAAATTAAGTATTTTTGAATAAAAGTTAATATTTGATATTAAATTATAAATTACGTATAAAATGAAAAAAAGTGTATGCTATGAAATAAATTTCGGTATGTTTTATTATAAAAAGATAAACTCAAAAATAATGGTACATCACATCTATTTCGGTCTAAATTGCTAAACAAAATAATTCAACATACATTTAAGTACATTGTCCTTGTTCAATATAGAACAAAATAGCTGATAATTTCTCGGCTCGTGCGCAAATATTACTACAAGCTTCCACTCCAGTAGTCATCGAGAGACAATCGGATTCTGATACAATGTTCATTAGTTTATTTGAACACGTCGGAATTTAGATTGACGTCTCTCAAAGTACATGATCTCTCTTGATTTGCCCAAGACGATGGAGCGGCATCAAACATTCATCGTGGAGTAGTGGCGGTGAGATTAGAAAGCAACTCATTCGTTATATAATGAAAGAATATCGAAGTATAGATGGACATTGAAGTGAGCTGGATGTATTGGAGGAATGTTGTAAACACATTTGCATTTCTTTATTGCGTCGTCGTACATATCATTCAGCTGTTTGAATTTGGGAGAGCATGGTTTTGAAGTGGAGAGAGCATGTAGCAGTTGTCTGCCACTATTCTTGAGCTCATTGAACACAATATATTTCAACCGACGAAGTGTCTTCCTCTGTTTGTAGTAGTTGATTCCATGACATCCAAACATGTTTCATATTATTTCATTTGTTTTCCATATGGATGATGGTTAAATTATTGCCTAAGCGCTCGTTGAACTCAATTGCGATATTTTCGATCAATTGCTAACTCGTCCAGCACGAGTATCTATTCGTGCTAAGCAGATTTTTATGAGAGCTAGCTTTTTTGAGAATTCTAATCGACAATGGTTTGGATTGAAGAGTCGGTGGAGGAGGTCGACATTCTAAATTCAAAAGAATTCTAAAAAAATATACATTGTACAGACTTGTGAAATAAACATAGAAAAGAAATCACCTAGACTTTGATTGAAAAATGTTAAAAGTGGGTTTGTTTTTTTTGGGTTTGGGATGGTGGAGGAAGAGAATGGGGTGGGGATTTATATAGGTGGAAAAACATCCGTTTCATATCACAGCCTGGGGCCTCGACATGTATGATGCATCAAAACTGTCCGGTACGAAACACTTTAATTGAACGGTGATTTTGATTCTGCTAGTCCATTTCAATTTCCGACACGTCCGGACTGGGAACGCACCCTTATGTTTATGTGTGTGTAACCATAATAGGCAACATGAGCTTCAAAAATATAACGAGACTCGGTAGAAATTCAACGTGTTTATTTATGGTAATGGTTACATGATGATCAATGAGTTCAAAATTACCCATTAAAATTAGGTCTGTCAATGGTACGAGTTTTGATCTGAATCCGCCATTTTAATGCGGGTACGGGTTTAGCTCCAACTACCCAGATCCGACCCGATTACCATTATGGTTTGGTACGGTTTGATCACAACCGGACCCAGTTTAGACTTGACCTGATTATTAGTTTTTTATATACCAAAACATGAGTGTGTAATGTTATTTGTTTATCATTTTGTTTGTATGCATGTAGATGTTTTTGCATCCTTCTATTATGAACTTGGCTTCATCACTTGTATGTTAACATTGTTTGTGAATAATTTTTACGAAATTATGAATTTAAAATATGGTTTTAGCATGAATATTACGAGTTGGATATTACACAACGGGCTTGAAAAGCCCGAATAGTCGGGCTCGGGTATTGGATTTACAGGAAATTATTGTCAAGGACAAAATTTCTCAGCATTTTTGCCTCAAGGACAGACCTTCAGTATTTTAACCTGAAGGACAACTTTCTTTAGGTATCAGTTTTTAAGTTTTTAGGTATCAGTTTGTAGTTATCGTTAGCAGTTTTTAGGTATCAGTTTTTTGTTTGGTAGCAGTTTTAGAAAAATGTTTGTCCTTATGAATAATTTTAAAAGAATGCTTGTCCTTATGAATAATTTTTAGAAAAATGTTTGTCCTTGTGGTTAAAATATTGAGGTCGTGTCCTTGAGGCTAAAAATATATAAATTTTTGTCCTTTAAATTAATTCCCCCTTGGATTTAACCCATCGGGTTCATCCAGACTCGGGTTTTAATTATTGTAACTAGGTCTGGGTCCGGGTTTTAAGATGCTCAAACCAAACCCGGCCCGTTGACATGCCTAATTAAAATAAAAGCCTTATTTCTAGTTAACCGATTATATAAAAAAAACTAAGTATAAACATTCAGCACTGGCCAACAGCTAAGGCTTGTGGATGCAAATGTCAACTACCATTTAAACTCAATCTGTTTACAGCACTACCTTTTTTTAGTGAATAAGTTTATTTCTTTAATAGGTACATTCCTGTGCTGATAATTGTTCTTCTTTCTTCCTTTTTTTTTGCCCCCCTTCTTTCTTTGTATGTGTTGTTTGTTTGAGCTTAATGTTTATATTTGGAAACATATAAAATAGTTGTTTTCAAATAGATGGTGTATAGATTACTGTTCTCCAAGTTTATAGGCACAATGGTCACTCTATGAGACATATGATTGCTGAATATGCTTTTCCTGGTCTCTGAGTGACATATAGTATCAGATGACAACATGATATCATGCATGTCGAATACTGCAGCCATTTCACCCATCTGCATAAGATTTGGTTGCTTATTGTGAAATGATGATATCATAATAATTAGCAATAATCCAATAAATACTCAACTCCTTGTGATATTTCAGGTCAGGTTTTCAAGGACGTAGTTGGGAGTCCATATTACGTAGCGCCTGAAGTACTACGTAAGCATTATGGACCAGAAGCTGATGTCTGGACAGCAGGAGTTATACTCTACATTCTGCTGAGTGGCGTACCGCCTTTTTGGGCAGGTCTGATTATATCAGTCATTTCTTAAATTAGCACTTCAAAGCAGGTTTATCTGTATAATCAGGCATATGTTTAAACTTACTGTTTTTCAATGTCAGAAACACAACAAGGGATATTTGATGCAGTATTGAAGGGAGTCATTGACTTTGATTCTGACCCATGGCCTTTGATTTCTGATAGTGCGAAAGATCTCATCAAGAAAATGCTTTGTTCTCCTCCTTCACAACGATTGACTGCTCATGAAGTATTATGTATGTTTGTTTATTCATAAATTTTTTAGCTGTCGCTTAGGCAAGCGTATAAAGTGCTTTTTAAAAACCAGTGCATCAAAAAACCAGTACTGATGCACGCATGTGTACATAGAAAAAAAAAACCATCTCATTTTATTTTTCTTTTAAAATAAGTTTTTGGTATATAAAAAAATGGTGAAATTGGCTGCAACATAATTTTGGTGCCTCTGAGGTTTGAATCCAAACTTCTAGAACTTCAGCGTAAAGCACTCATTTAACATGGGTATTTTTGTAATATCGAAAGCTTAAAATGGATGTATTTTCGTTATATATAGATAAATAAATCTTTTGATAAAACATTATTGACTCAGTACTTAACTTGGTGGATATAGGTCATCCTTGGATTTGTGAAAATGGAGTTGCTCCAGACAGACCATTGGATCCAGCAGTACTATCTCGCATCAAACAGTTCTCTGCAATGAACAAGTTGAAGAAGATGGCTTTAAGAGTAAGTGCATCTCCTATCCTTTTATGTTTTAAGTAAATATTATTGCAAACATCAGAAAGTTTAAATTTCGATAACCAACCCAGTTATTTTTGAATGGAAACACGATATAAAGTTCGTTATCTTTTCCCCCTTTTTTTTCATGGGCAATCTACATCACTTAAATGGTTATACATTTAGATGGTATGGATAAGTACAAATGCAATGTAGACAAAATGACAGACCGATGAGAAAATGTGAAGAGGAAATATCTACATAAAAGGGAAATGACAACAAGAAAAACCCAAATTAACATGGAAAGAAAGTGTTAGAAATGATATAGAAAATTAAGCTTAACTAAAGATATGATTTTATGATACAACTTTGTTGTGAAAGAAAATTCATGTGGCCTACCCCGATGATTTGCGATTAAGCAGACGATGATAAATTTATATGCTGTTTTTTCAGGTGATAGCAGAAAGCTTATCAGAGGAGGAGATTGCTGGACTGAGAGAAATGTTTACAGCAATGGATGCAGACAACAGTGGTGCAATTACATTTGATGAGCTCAAAGAAGGTCTCAGAAAATATGGTTCCACATTGAAAGATACTGAAATACATGATCTCATGGCAGCAGTAAGTTCGCATTTGCCCATCCTAATTACCAATCAACATTGAATCAAATTATTATAAAAATACACACATGTGCACACGCACACACGTGCGCACACAGTGACACACATAAATACATATAGAAACCACAACTGATAAACTGAAACTTGAACTAGGCTGATGTGGACAATAGCGGTACTATCGATTATGGGGAATTCATTACTGCAACTGTACATCTCAATAAATTGGATAGAGAGGAGCATTTGGCAGCAGCATTTGCATATTTCGACAAAGATGGTAGCGGTTATATCACTGTGGACGAGCTGCAGCAAGCTTGTAAAGAGCACAACATGGAAGATGTTCTTCTTGAGGATATTATCAGTGAAGTCGATCAAGATAATGCAAGTTTATTTTACATAACAAACTTTCCACCTTCATTCATTTTGCATAAAATAGAGTTTGGTTGACGGTGTTTTTTCATTATGTATATAGGATGGACGCATTGACTATGGGGAATTTGTTGCTATGATGCTGAAGGGAAATATGGGAGTTGGAAGAAGAACAATGAGGAACAGTTTGAATATAAGTATGAGGGATAACTTTTAACGTGTTTTTTCTTGTTTTATTATTGAATTTACTCTGTTACTTGCTACTTTACATCTGCAATGTTCATGTTGATTGTAACTGTACTACGAAGCTTGTATGTTGTAACTTTTCATCTGAAATTTCAGTGATTAATGTTGTGCTCAGTGGTCTGGTTGGCGCATGCATGTATGAATTATGCTCTTTGCATGATCTTTGTATAGTATTTGGTTGGTACATGTATTATCACATGGTAAGGTTCTGACCATTATACAGGAGAAATTTGCTGCTACCTTTTTCATTGAAAATTATTAAAAACAAATTGTGGCTTTTTACTGAGTTTAGAATCTATTAGTAATATTTGATTTTTAGAACATTGTTTGGATTGTTCTTTAACTAAAGAGTTTCTTAATAAATAAGTTTTTACTATGTTTACACAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020260122.1	1.8e-220	calcium-dependent protein kinase 26-like
Swissprot	Q38872.1	1.7e-212	Calmodulin-domain protein kinase CDPK isoform 6
trEMBL	A0A5P1E5H6	5.6e-216	Calcium-dependent protein kinase 26

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17290.1	78.75	0.0	889	ATCDPK3;ATCPK6;CPK6	Calcium-dependent protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC4G06511	AT2G17290.1	546	106	3	1	539	1	543	78.75	889
AfisC4G06511	AT4G35310.1	558	103	4	1	539	1	555	77.60	885
AfisC4G06511	AT4G38230.2	495	99	1	46	540	19	510	79.39	830

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	81	339	240.3	2.1e-71
PF13499.3	EF-hand_7	Domain	387	447	38.5	1e-09
PF13499.3	EF-hand_7	Domain	457	517	44.2	1.7e-11

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005777	C	peroxisome
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005789	C	endoplasmic reticulum membrane
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019252	P	starch biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network