result

Gene information

Detail information of AfisC4G06627

Location

Gene	Chr	Start	End	Strand
AfisC4G06627	chr4	1238180069	1238180284	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009420916.1	2.9e-14	PREDICTED: protein FEZ-like
Swissprot	Q9ZVH0.1	9.2e-13	NAC domain-containing protein 9
trEMBL	A0A804KU99	2.1e-14	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G26870.1	76.19	7e-15	75.5	ANAC009;FEZ	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G06627	AT1G26870.1	42	10	15	56	20	61	76.19	7e-15	75.5
AfisC4G06627	AT5G39820.1	42	16	15	56	17	58	61.90	8e-12	65.1
AfisC4G06627	AT2G43000.1	42	17	15	56	15	56	59.52	2e-11	63.9

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC4G06627
Allium sativum	Asa0G03701.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	20	55	34.9	1.9e-08

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0005789	C	endoplasmic reticulum membrane
GO:0005992	P	trehalose biosynthetic process
GO:0006561	P	proline biosynthetic process
GO:0008283	P	cell proliferation
GO:0009555	P	pollen development
GO:0009819	P	drought recovery
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009735	P	response to cytokinin
GO:0009737	P	response to abscisic acid
GO:0009741	P	response to brassinosteroid
GO:0010114	P	response to red light
GO:0010120	P	camalexin biosynthetic process
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0031930	P	mitochondria-nucleus signaling pathway
GO:0042538	P	hyperosmotic salinity response
GO:0042803	F	protein homodimerization activity
GO:0045491	P	xylan metabolic process
GO:0045770	P	positive regulation of asymmetric cell division
GO:0046982	F	protein heterodimerization activity
GO:0048103	P	somatic stem cell division
GO:0048759	P	xylem vessel member cell differentiation
GO:0048829	P	root cap development
GO:0070301	P	cellular response to hydrogen peroxide
GO:0071365	P	cellular response to auxin stimulus
GO:0071555	P	cell wall organization
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0090059	P	protoxylem development
GO:0090602	P	sieve element enucleation
GO:1900056	P	negative regulation of leaf senescence
GO:1900409	P	positive regulation of cellular response to oxidative stress
GO:1901348	P	positive regulation of secondary cell wall biogenesis
GO:1990110	P	callus formation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network