result

Gene information

Detail information of AfisC4G06642

Location

Gene	Chr	Start	End	Strand
AfisC4G06642	chr4	1239749660	1239757562	-

Sequences

CDS

Protein

Gene

>AfisC4G06642
AACATACACAAAATTTGGAAGAGATTATTACTGTTTTGCTAAAAATGGTGAGAGCTCCATGTTGTGATAAGATGGGTCTGAACAAAGGCTCATGGACTGAAGAAGAAGATCAAATTCTAATTAACCACGTTCAGAGATATGGCCGTAGCAATTGGAGAGCTCTTCCCAAGCAAGCGGGTAATCATAGCGGTAGTTGGTTTTGTATCATTGAAACATTCAGGTTATACACATACACAAGTGTACATACACGCACAGATATATACACAAATACATACTTTATCATGTCTTGTGTAAGTGTATATAAATGTACTCATGGAAAAAAAAACATAATTGTTTAAATAAGCAAAACTTAATTTTCATATGGTTCCTTGCAAAAAAATATTGAACATGAAACAAAAGCTTGTACTAATAGAATACTAAATGTATGAATGTAAAATAAATCTAAAAAAAATTGAATATTTTAGAATCTAGAGAATGATGCACTACCCATGAAAACATAAATAAACTAAAGGTACGTTCACTCAAACACGCTTCAAAAGAATAATGTAGTGTTTGGTTTGTTATTTTTAGTTTTGAATTTTCGTTCATACAAAAATGCACACGACACATCTAAATTGTCGAAAACGACCAATTTAGAAAACGAAGTTAACATACAAAATAAAAAACAACTTTTTTTTATTTTCCGCATTTTGGAACATAACACAAGAATGTGAAATAATCCATTATTCCGTCATCCTCCTATTCCCTTCGTCCTCTCATCCGTTTTTCTATCATCCATTCCGTCATCCTTCTATTCTTCTTATATTTGATATATGATGCAGCCTAGCCTGATGAAGACTTAGGTCGCGAGCGACCTAACAAGCTGTTAAGTCGCGTGCGACCTAACAGAGTGAAGAATGACGAGATAAGAGGAAAGAACGAGACAAGTGATACAGTGAAGGACCATGCAGAACACCAGCTGGATATTCTTAAGTCGCTTGGACGACCTAACGAGCTAAGTCAACAAGTTAGGTCGCGAAGTTCATATGTTGCGAAGGTCGTAGGTCGCCAATGACCTAGCAGGAAGCCACCATATCTTGGGTCGCTACGAACTACTGAGTCACGAGATAAGGACTTGCGACCTAACGAGAAAGATAATATAGATAACACAGTGAAGAACGATGAAGAGTGTCAACAGGTTAGCCATAGGTCGTTGGAACGACCTAACAAGCTTAATCAGTGGGATAAGTCGTTGGAACGACCTAACAAGTTAAATCAATGGGATAGGTCGCTGGGACGACCTAACAAGCTAAATCAGTGGGATAAGTCGTTGGAAAGACCTAGCGAGTTAAAGCAAACCTCATATCACCCAGATTCCTTAGGTCGCTCAAGCAAGTTAACAACCTATGATAAGTCGCGACCTAGAACCAACGAGCTACGACCTAACCTAGGTCGCGGGAACGAATTGCGACCTATGTTAGATCGCGGAATTTCTTATATTGCTTTTCTTAAGCCATTCTCTTGTGCCGAAGCTTAAGTCGCATTCATTTTTAGGTCGCTCGACCTTATGCCGCTGTGAAGATAGGTCGCTGCCGAGTTCCATTAGATCGCTACTGGATGCTAAAGCTTAAGTCACTGGAAAGATAGGCCGCTAAGTCGCTCCTGGAGGATATGTTATGTCGTTTGAGTCCTTAGGTCGTGGGTGTTGTAATCTTAGGTCGTTGTGTTGTAACTCGTGTCTGTTAACTCTTTTGTTCTTATGTCGTTTGTATGTTGTATTTGTTAACTCGTGTTGTATATATGTTGAGTCGCTTTGTTATAAGGTCGCGTGATGTTCTGTTTAGGTCGTTAACGACCTATGTTAGGTCGGTCACGTATGTTAGGTCGTGATGGCCTTGTAATGTGTTGTGATGTAAGTGTAGTGTTGTGTTGTAACCCTATAAATAGGGATGGTGGTGTCATTTGTAAAGTAAGTTGATTTTGAATAAACTTTTGTTTGAGTGCTTTGTGTCTCTTCTCAAATTGGTAGTTGAGTGTAATCTCCTATCTCAACCTTCGGAATTCGAGTGCGCTCGAATCAACGATTGTTGAAGCCGATTCACGGTATCAAGTGCGCTTGATCAACGTTCGAAGAATCGTAGATCTTCCTTCACGGCATCGTGCGCGATCAACGCGATGAAGATAGCTAGAATCCGGTATCTTTGAGACCAACGGATTTGAGCGTTTGGTATTTTCAATCCACCGATTGTTACTTTCACCGTTTCAAACATTTCTGTTATCCGCCGCTGCGTCATTTGGTATCAGAGCTAGACTTAGCCAATCATAGCTAAACCGAGTCTTTAGAGCCAATTCTTATTTAAGAATTCAAGCCGAGCCAATTGAGAGTTGAGCCGAGCTAAGTTGAAGTGTGAAGTTCAATTTGAAGTTAAAGCCGTGCATTGTTTGTTCATTTGTAAGTCAAGGCCGAGAGTTAAAGTTTGTTGAAGATCAATCATGCATCCGAGAAGAGGTAATCGTCATCAGAATATTGCCGATGTGTATAGAAGAGAAGATGCTAAGGCAATAGAGCAACGAAATAGTGATAACCTCGAAGAGAAGTTCAATAAAGGTTTTGGAAAGTTGGAGAAGTTGATGATGAATTTGAATCAAAGTCAAAAAGGAAGGTCACCAGTCTTGAACCATGGAGGAAACAGAGTTTCGCCATCGGTTACGGAAGCAAGGAGGGTGTCGCCACAAACTTATCAAGATAAAAGGGAATCATCAATTTCAATGAGACGAGATCACCATGGGTACAGAGATGAAGAGAGAAGAACTCCACGTGAGTTTGACAATGAACCATGTCGTGATGACAAAAGATCGAGTAGAAGAGATTTGCATGATCATAGAAACATACGTGGTCATAGAGACGAAGGGTGTAATTTGCCAAAGCATGAGAATGATTCTATTTGGCTAAGGGACAATATTTTTCAGTCTACCTGTACTATCTTGGGAAAGGTTTGTAAATTTGTTATTGATGCGAAAAGTTGTGATAACCTTATTTCTAAAGAAGCTGTTAAGAAGTTAGGGTTGAAGACTGAAAAACACCCTAGACCGTATAAACTGGCATGGATAAAGGAAGGGGAAGAAGTGACGGTGGGAAGACGAACATTGGTTACATTTTCTATTGGGAAAAAGTACAAAGATGATATATGGTGTGATGTGGTTGATATGGATGTGTGTCACCTACTCTTGGGAAGTCCATGGCAGTATGATCGAGTTGTACAACATAATAGTCACGCCAACAGCTACAGTTTCATGTTCGAAGGAACCAAGATTACCTTAGTTCTTAAGAAGAGTGAACAAAGAGACTGCAAGCCAGAGAAGAAGATGGAATCGACTAATTTAATATCTTCGAAAGAATTTGTTGAAGAAGTGAAAGGTGGTGTTGAAGTGGAAGATGAAGTCGATTGTTCTCAACTGCCGAAGTTTGATGAAGATAAAGTTAATGATTTTCAACCAACGAAATTTGATGAACATGAAGTTGAAAATTCACAACCAGCGAGGTTTGATGAGGATGAAGAAAGTGTGTCAAGAGATGAAGAGAGTAAGTTATCAGTGAAGAAGGAGGATTCAACTAGTATACAGTCTACAAGAGAGTTTGTTAAAGAAGTGGAGGATAGTGCGGAAATGTTTATGTTGAATGAGAATGAAACCAGTAAAGGTCTCGAAACTCTTGAGGAGGATGAGCCAGTGGTTAATGAATGTGAAGATGTAGTTCCTGCAGAGTTGCCCAAGGAATTACCGCCATTGAGGGACACACAACATCATACTGATATAGTGTCAAGTGCTATTGTACCGCATAGACCACGATATCGTATGTGTCCAACAGAACAAGAAGAGTTGAGAAAACTGGTTGATGGGTTGCTAGTCAAAGGAAGTCAGTTGTCTACTACAGATTGCAGTTGGAAAATGAAATTTATCAAAGACTTACATGTAGGAAGACACTTGAGCTGTGATCGTACTATGCAGTTAATCTCACAGTCTTATTTTGAATCGTCACTGAGGAAGGAAGTTGAAAGGTTTGTTCAGAAGAGCCATAATCGACAAGTCTCAAAGAAGACCACGGCAAATGCAAGTTTATGTATGTCGTTGCATATACATGCTAAATTACGGGAGGAGGTTAGTGTGGACTTTGTTTTGGGATTGCCGCGAACGGAACATGGCAATGATTCTATTTATGTGGTGGTTAACTGGTTTTCAGAATTGATTCATTTCATTATCTATAAGAAGACTGCAGAGACCGTTAATGTCGTTCAGTTATACTCCAGAAAGATCTATCGATTTCATGGATTACCTGAATCTATTGTTTCGAATAGAGATACTCGTTTTCTGAACCATATCTGGAAGAGTCTATGGAAAATGGCTAGGACTAAGTTGAAATCTAGTAGCGCTAATCATACACAGACGGATAGACAAGCTGAAGTTGTGAACAGATCCCTAGGTAATCTATTGCGATGCCTCGTGGATGATAATTTGAAAAGTTGGGATTCGAAGTTATGTCAAGCGGAGTGTGCACACGACCATGCAGTTAATCGTAGCATTTGGGCATTTGCGTTTGCACACAACCACACAGTTAATCGCAGCACTGGGTTCAGTCCAGTCCAGGCTGTTTATTCAACAATCCCTAAAGAACCGTTAGATCTATCAACAGTGCCACCGCAGAGAGGGGTGATTAAACGGACTAATGTTTTTGTGAATGAGTTGCAAGGATGCTACAAAGTTGTACAGAAATGATTTCTTAAGGCAACTGAGAAATATAAGCAATCAGCAGAGATTAAGCGACGAAGCATTGAATGCAAGGAAGGAGTTTTTTTGTATGCGGTGTTTACCAATGATCGATTTCTTTTTGGAACGTACAATAAGCTAGAAGCTAGAAGGAATGATCATTTAGAAGTCGTGAAGGGAATTAACGAGAATGTTTATAAATTGAGTTTGCCGGATCATCTTCCTATTGCCAACATTGACAATATCAAACACTTGGTTCCATTTCACGAGGATAAGAGTATCGAAGACGAAGAGCTTTTAAATTCGAGGACGAATTTTTCCCAACCAGGGGAGGATGATGCAGCCCAGCCTGATGAAGACTTAGGTCGCGAGCGACCTAACGAGCTGTTAAGTCACATGCGATCTAACAGAGTGAAGAATGACGAGATAAGAGGAAAGAACGAGACTAGTGATACAGTAAAGGACCATGCAGAACACCAGTTGGATATTCTTAAGTCGCTTGGACGACCTAACAAGCTAAGTCAACAAGTTAGGTCGCGAAGTTCATATGTTGCGAAGGTCGTAGGTCGCCAACGACCTAGCAGGAAGCCACCATATCTTGGGTCGCTACGAACTACTGAGTCACGAGATAAGGACTTGCGACCTAACGAGGAAGATAATATAGATAACACAGTGAAGAACGATGAAGAGTGTCAACAGGTTAGCCATAGGTCGTTGGAACGACCTAACAAGCTTAATCAGTGGGATAAGTCGTTGGAACGACCTAACAAGTTAAATCAATGGGATAGGTCGCTGGGACGACCTAACAAGCTAAATCAGTGGGATAAGTCGTTGGAACGACCTAGCGAGTTAAAGCAAACCTCATATCACCCAGATTCCTTAGGTCGCTCAAGCAAGTTAACGACCTATGATAAGTCGCGACCTAGAACCAACGAGCTACGACCTAAGCTAGGTCGTTGGAACGAATTACGACCTATGTTAGGTCGTGAAATTTCTTATATAGCTTTTCTTAAGCCATTCTCTTGTGCTGAAGCTTAAGTCGCATTCATTTTTAGGTCGTTCGACCTTATGCCGCTGTGAAGATAGGTCGCTGCCGAGTTCCATTAGATCGCTATTGGATGCTAAAGCTTAAGTCGCTGGGAAGATAGGCCGCTAAGTCGCTCCTGGAGCATATGTTATGTCGTTTGAGTCCTTAGGTCGTGGGTGTTGTAATCTTAGGTCGTTGTGTTGTAACTCGTGTCTGTTAACTCTTTTGTTCTTATGTCGTTTGTATGTTGTATTTGTTAACTCGTGTTGTATATATGTTGAGTCGCTTTGTTATAAGATCGCATGATGTTCTGTTTAGGTCGTTAACGACCTATGTTAGGTCGGTCACGTATGTTAGGTCGTGATGGCCTTGTAATGTGTTGTGATGTAAGTGTAGTGTTGTGTTGTAACCCTATAAATAGGGATGGTGGTGTCATTTGTAAAGTAAGTTGATTTTGAATAAACTTTTGTTTGAGTGCTTTGTGTCTCTTCTCAAATTGGTAGTTGAGTGTAATCTCCTATCTCCACCTTCGGAATTCGAGTGCGCTCGAATCAACGATTGTTGAAGCCGATTCACGGTATCAAGTGCGCTTGATCAACGTTCGAAGAATCGTAGATCTTCCTTCACGGCATCGTGCGCGATCAACGCGGCGAAGATAGCTAGAATCCGGTATCTTTGAGACCAACGGATTTGGGCGTTTGGTATTTTCAATCTACCGATTGTTACTTTCACCGTTTCAAACATTTATGCTATCCGCCGCTGCGTCAATATACATATTGAAAATCGAAAACACAAAATTCATTTTTAAACCAAACACTACCTAAGCTTCTCGTGAAACCTAAGCTTCTCGTGAAACCTAAGGTTTCACGAAAAATCATGTTACCATGACAAATGAAAATTTTCGTTTTAAATTGCACATATTTTTTATTTTAACCGTAAATATTTACAGTTCTAACTGTACAGTTTATAGAATAAAAATTTACGATAAAAAACGCAAGAATTTGCAACCTACACTTAAATATTTCCAGTCCACTATAAATATGTGCATTTTAAACTGCATGCATTTGCATTTTAAACTGCACACACGTTTTCGTTTGAAAACGTTGATTTGGTGTTTTGTGTTTTAGAAAGGTTTTCCAGATGTTAAGTTTGAAAACAAGAGGCGGATACTAATGTCCACTGAACTAAAATTAATGAGTATTGTTTGTTAAAATTGAAATCGAATCACTCACCACTTTTGTATAATAAAGGCATTGCGAACAGTTGGCATTTGCATAAAAAATGGTAACCCCAAAGGAGCTATAACTACTATTAAGCATAATTATTTGGACGTGTTCATTTGTATCTCAGGATTGTTGAGATGTGGAAAGAACTGCAGGCTGAGATGGATGAACTAGTTAAGACCAGATATTAAAAGAGGAAAGTTTAGTGAAGAGGAAGAAGACATGATTATAAGCTTGCATGAACTGCTAGGGAACAGGTAAGAATATTCAATATTGTATGCAAAATAAGTTTATAAAATAGAATTTAGTATATTATGAATGTTGCATGCATGCAGATGGTCGCAAATAGCAGCGAAATTACCAGGCAGGACAGACAATGAGATCAAGAATGAGTGGCACAAACATTTAAAGAAAAAGCTTGCTAATTCAGATATTTCAAAAGAATTGACTCCAAATAGTTCAATAAATCAGTCAAAATTGAATGGGCTAATCTCGAACACCATGATAATGCAAACAAATTCAGTGAATTTGAGTTTAAATGATGTTAATATCGGCCAAATATTATCGGGCACTGCTAGTTCTACATCGAGCATCGTCATATCTGATAGTTTTGATTATTCTTCTATCTATGAAGAAAAAGCAGAAATGGATGCGAATTCGTGGACCGGTGCCTCGTATTTAGAGAATTCAGTAACTGATAATTTGACCTGTACATCAGGCAATGAAGATCTGAACTTTTGGTACAGAGTTTTTATGAAGGCAGGAGAAATGCAAGATTTTGCAGAATTATGAAAGAACCTAGTGTGTCAATTTCGAATATTGTTATCCTTATTTTTTCTTCTTAAATTAAGTTAATTCAACTGTAAATATAAAGTTGATTTCTTTATAATATTTATTCACTATATTTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	EMS62386.1	2.2e-17	Myb-related protein Myb4
Swissprot	Q9SJX8.1	1.6e-15	Myb-related protein 14
trEMBL	G3LZX9	1.6e-17	MYB33

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G31180.1	36.31	6e-17	83.2	ATMYB14;MYB14;MYB14AT	myb domain protein 14

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G06642	AT2G31180.1	179	87	7	2	163	78	246	36.31	6e-17	83.2
AfisC4G06642	AT3G23250.2	208	86	9	2	160	21	224	33.17	1e-16	82.4
AfisC4G06642	AT3G23250.1	208	86	9	2	160	78	281	33.17	2e-16	81.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	2	36	37.4	1.9e-09

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0016049	P	cell growth
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009611	P	response to wounding
GO:0009651	P	response to salt stress
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009809	P	lignin biosynthetic process
GO:0009845	P	seed germination
GO:0010090	P	trichome morphogenesis
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0042335	P	cuticle development
GO:0043565	F	sequence-specific DNA binding
GO:0045165	P	cell fate commitment
GO:0048354	P	mucilage biosynthetic process involved in seed coat development
GO:0048765	P	root hair cell differentiation
GO:0080091	P	regulation of raffinose metabolic process
GO:1900384	P	regulation of flavonol biosynthetic process
GO:1901348	P	positive regulation of secondary cell wall biogenesis
GO:1903086	P	negative regulation of sinapate ester biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network