Detail information of AfisC4G06789


Location
GeneChrStartEndStrand
AfisC4G06789chr412648683421264868960+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPWA38961.12.7e-07Zinc finger, C2H2
SwissprotQ42453.14.5e-07Zinc finger protein ZAT7
trEMBLA0A8T1RHF43.9e-08Zinc finger protein ZAT11-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G46090.150.001e-1991.7ZAT7C2H2 and C2HC zinc fingers superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag92235.t1
Allium fistulosumAfisC4G06789
Allium sativum
Arabidopsis thalianaAT3G46070.1; AT3G46080.1; AT3G46090.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain335844.96.7e-12
PF13912.3zf-C2H2_6Domain729739.72.8e-10

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0006979Presponse to oxidative stress
GO:0008270Fzinc ion binding
GO:0009408Presponse to heat
GO:0009611Presponse to wounding
GO:0009631Pcold acclimation
GO:0009643Pphotosynthetic acclimation
GO:0010200Presponse to chitin
GO:0010224Presponse to UV-B
GO:0044212Ftranscription regulatory region DNA binding
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding
GO:0071289Pcellular response to nickel ion
GO:2000280Pregulation of root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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