Detail information of AfisC4G06827
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC4G06827 | chr4 | 1274003833 | 1274030971 | + |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | AML76798.1 | 0.0e+00 | putative LOV domain-containing protein |
| Swissprot | O48963.1 | 0.0e+00 | Root phototropism protein 1 |
| trEMBL | A0A126WWW4 | 0.0e+00 | Putative LOV domain-containing protein |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT3G45780.1 | 67.40 | 0.0 | 1301 | JK224;NPH1;PHOT1;RPT1 | phototropin 1 |
| Species | Genes |
|---|---|
| Allium cepa | g20005.t1 |
| Allium fistulosum | AfisC4G06827 |
| Allium sativum | Asa5G05730.1 |
| Arabidopsis thaliana | AT3G45780.1; AT3G45780.2 |
| Oryza sativa | LOC_Os11g01140.1; LOC_Os11g01140.2; LOC_Os11g01140.3; LOC_Os12g01140.1; LOC_Os12g01140.2; LOC_Os12g01140.3; LOC_Os12g01140.4; LOC_Os12g01140.5 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF13426.4 | PAS_9 | Domain | 160 | 256 | 61.7 | 5.8e-17 |
| PF13426.4 | PAS_9 | Domain | 445 | 537 | 67.1 | 1.2e-18 |
| PF00069.22 | Pkinase | Domain | 625 | 909 | 213.4 | 3.2e-63 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0000155 | F | phosphorelay sensor kinase activity |
| GO:0000160 | P | phosphorelay signal transduction system |
| GO:0003729 | F | mRNA binding |
| GO:0005773 | C | vacuole |
| GO:0004674 | F | protein serine/threonine kinase activity |
| GO:0005198 | F | structural molecule activity |
| GO:0005524 | F | ATP binding |
| GO:0005730 | C | nucleolus |
| GO:0005874 | C | microtubule |
| GO:0006355 | P | regulation of transcription, DNA-templated |
| GO:0007018 | P | microtubule-based movement |
| GO:0007623 | P | circadian rhythm |
| GO:0042802 | F | identical protein binding |
| GO:0008728 | F | GTP diphosphokinase activity |
| GO:0009507 | C | chloroplast |
| GO:0009638 | P | phototropism |
| GO:0009785 | P | blue light signaling pathway |
| GO:0009860 | P | pollen tube growth |
| GO:0009882 | F | blue light photoreceptor activity |
| GO:0009898 | C | cytoplasmic side of plasma membrane |
| GO:0009903 | P | chloroplast avoidance movement |
| GO:0009904 | P | chloroplast accumulation movement |
| GO:0009925 | C | basal plasma membrane |
| GO:0009986 | C | cell surface |
| GO:0010119 | P | regulation of stomatal movement |
| GO:0010150 | P | leaf senescence |
| GO:0010155 | P | regulation of proton transport |
| GO:0010181 | F | FMN binding |
| GO:0010362 | P | negative regulation of anion channel activity by blue light |
| GO:0010540 | P | basipetal auxin transport |
| GO:0015970 | P | guanosine tetraphosphate biosynthetic process |
| GO:0015979 | P | photosynthesis |
| GO:0018298 | P | protein-chromophore linkage |
| GO:0019901 | F | protein kinase binding |
| GO:0023014 | P | signal transduction by protein phosphorylation |
| GO:0046777 | P | protein autophosphorylation |
| GO:0048766 | P | root hair initiation |
| GO:0080147 | P | root hair cell development |
| GO:1901981 | F | phosphatidylinositol phosphate binding |
| GO:2000114 | P | regulation of establishment of cell polarity |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| K20715 | PHOT; phototropin | EC:2.7.11.1 | - | - |
| K08286 | E2.7.11.-; protein-serine/threonine kinase | EC:2.7.11.- | - | - |