result

Gene information

Detail information of AfisC4G06884

Location

Gene	Chr	Start	End	Strand
AfisC4G06884	chr4	1288582010	1288584808	-

Sequences

CDS

Protein

Gene

>AfisC4G06884
ATGAACTGTACATTTATTACCGTGGAACCTTCTTCATGGTATATATTACTTACCGCTTTCGTTTAGCATTATTTTTCATTTTCAATTCTATACTTAAGCTAACAGTTTGTATATCAGGTCTATCGAAGAAAGTAAAACTTGATTGGGACATATGACTTAAAATAGCAGTAGGGGTTGTACAAGGCCTTGCTTATCTTCACCACCATTGCAATCCTCGAATAATCCACAGGAATATTAAAGCTTTCAACATACTTCTTGATGTGTATTTTGAAGCTTATTTGTCTGATTTTGGTATAGCCAAATGCATACCTTCTTCTAAAACCCATTCTTCAACCTGTGTTTCGGGAGCAATTGGATACATCGATCCTGAATATGCTCGTACTTCAAGGCTTATAGATAAATCTGATGCATATAGTTTTGGAATTGTTTTTCTTGAGTTGCTTATAGGGAAAAAAGCTGTAGAGAACAAGGATAATTTGCATGAATTGGTATGTTTAGTTAATCTACAAAAGTTTATTTTCATATATCCACGAACATGCATACATGTGTACGCTGGTACACTAATGTACATGATGTACAAATGCATGCACATTGTACAGTTTCATGCATATAAATACAAATGCATGCACATCGTCTTTTTATATAGTTGCCTACAAATCAGAATAAAACCGGTATTGGATGGCTCATTTGATATTAATACTGGCTAATTCTTCTATGATCATTTTCTACTTTGGCAAGCTCCAATTGGTAGGCATCATGAGTTTGATGGGGAGACGTTAGAGAATATATATGTTTATTATGTTAGAGATTTTTATAGATTTAGGATGTTAGAGAATATTATATATTTGTTAAGAAATGTTACGAATATTTTAAGGGAACATTTTACTCATACACCACAAATTATTTTAAATACACCAAAATAATTATCAAAATCATATACACCATAATTTACTTATTATACACCATCCATATTACAACATTACCCTCATTTTTTATTAAAGTAAGACACTAAATTCATCTCTCTCTCTATCTTCAATCAATCAACCCCATAAATTATAAATTATAGATTTGCTAAGTTTAATTTGCAGATTTCAAATTTTAGTTTCTGAACAACTAGTCTGTGAAAATGCATTCTCAATCATCCCACCAATCAATAGGGCTCGTTTGATATTAATTGCAATTTCTGAATTTAGGTACAAATATGATTTAAAATTTGGGAATTATATTATCTTGATATCACTACAACAAAAATACCCTATTACAACGCCCTTTTTACAACGGGCATTGGCTGCCCATTGTAATAGAAGGCTATTACAATGGTCCGCTCAGGCCCGTTGTAATAGATGCCCTATACAACGCCATTTTCACAATGGACGATGATAGCCCGTTGTAATAGAATGCTATTACAACGGTCCTTTCTAGCCCGTTGCAATAAATGTTAATTTTACAACGTTCACTACTGCCCATTGTAATATATAACAATTTTACAACGGTCAATTTTTTTTGCTCCAGCTATGAAATTTTGGATCGTTCGTTTTTTAATTTATTACCGATCCTTTGCTCTTCCCAAACCCTAATTCCCAAATCCCTAAAAATACTACGCTGGTCCTCCTAATCTCTCCCTCTTCCCTCCCTCCTAATTCCCAAATCTCTATTATCCCAAAACTTCACTAATTCAGTTCCAAATACCTCTGAACACTCGAGATTATAATATCAACGTAAATCAACTGATTGTCAATACAATTCAATTCGAAATTTTAAAATTCCACGGCCAAAACTGATGAATTTGTCGCGGTTTTGGGTTCGAACAGAAATGCTTGGTGGTTGGCAATTTCAAGTCGAGGCGGGTTCGAGGCGATTGTCGAATCGATTTGGTTGAAAGGCGGTGAAGTCCTGGGTGCAGTGAGATGATTAGGGAAATCGTGTTGTCGGAGGTTGAATTGACACGGCATGGGCCTTCCCCTAAAAAACACACAGATCAGAAACCAAAGCGAAGTGGTGATAAAGAAGACAACAAAAGTGGAGGAAAAGGTAGTTCTTCGTCCACTCCTTCAAAACCCGGTGGCAGAAGGTACAAACTTCTCAAGGATGTTTTATGTTAAGGATGCATCAATCTACTCATATATAACTATATCTTTCTTTGAGTTTTAGTTTATATTTTGGTCGGTGAAATAAATTGCTTTGTGTTTTCTGTGTCCAATCCTAGTAGCACTCAACAATTATGTATATCAAAAAATTTTAGTTGTGTGGAGATAAAGTGGAAAATAAATTTGTTGCATAACATAACATAACAAGGAGTTTCATGCATTAATATTTTTGCTACATATTCATTTTCCTTTCTGATAAACTGCAACTTTTTTTTAATTTTTTTATATCATAACTTATAGATTACTATATATGATCTTAAGATCCTTCAGCACATGTAAATACATATACATACTTACATACACACATGTAAATACATAACATAGGAAAATTCTCCACATTTGTGTGTTTTTTCCTAGTCTCTCCCTTGATTAGAAGTTTACATCGACCAGTATTATGCTGTGAAAATAGCAAGAGGCTTAGCATCGTTAGTTTCACCAAATTATGTATACGTTTAGTTGCATCATTAGTTTTTACCTGTTCAAATTGTATAAAACACCAAGCTTTCACGCTCTAAACCTCTTACTAATCAGCTCATATTTAGTTTACTAGGCGATCATGTTAGTAGTATAAATTTTTAATTTGGAAAAAATAAATAATGCATGTATACCAATGCTGTTACTTTCTACGCTTATAGATATAAATAATGTGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3332333.1	4.7e-29	LRR receptor-like serine/threonine-protein kinase ERL1
Swissprot	Q658G7.1	1.1e-30	Stress-induced protein kinase 1
trEMBL	A0A833RBP2	3.4e-29	LRR receptor-like serine/threonine-protein kinase ERL1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G62230.1	70.65	4e-32	133	ERL1	ERECTA-like 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G06884	AT5G62230.2	92	27	14	105	725	816	70.65	4e-32	133
AfisC4G06884	AT5G62230.1	92	27	14	105	773	864	70.65	4e-32	133
AfisC4G06884	AT5G07180.1	92	29	14	105	776	867	68.48	1e-30	128

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	15	114	47.3	1.5e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0001558	P	regulation of cell growth
GO:0001944	P	vasculature development
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005777	C	peroxisome
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006221	P	pyrimidine nucleotide biosynthetic process
GO:0007049	P	cell cycle
GO:0019722	P	calcium-mediated signaling
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009553	P	embryo sac development
GO:0009611	P	response to wounding
GO:0009651	P	response to salt stress
GO:0009664	P	plant-type cell wall organization
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009808	P	lignin metabolic process
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009845	P	seed germination
GO:0009846	P	pollen germination
GO:0009942	P	longitudinal axis specification
GO:0009944	P	polarity specification of adaxial/abaxial axis
GO:0009945	P	radial axis specification
GO:0009965	P	leaf morphogenesis
GO:0010073	P	meristem maintenance
GO:0010103	P	stomatal complex morphogenesis
GO:0010148	P	transpiration
GO:0010152	P	pollen maturation
GO:0019901	F	protein kinase binding
GO:0030155	P	regulation of cell adhesion
GO:0042277	F	peptide binding
GO:0051260	P	protein homooligomerization
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0046777	P	protein autophosphorylation
GO:0048281	P	inflorescence morphogenesis
GO:0048364	P	root development
GO:0048481	P	plant ovule development
GO:0048508	P	embryonic meristem development
GO:0048653	P	anther development
GO:0051302	P	regulation of cell division
GO:0070370	P	cellular heat acclimation
GO:1905421

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network