result

Gene information

Detail information of AfisC4G06980

Location

Gene	Chr	Start	End	Strand
AfisC4G06980	chr4	1305449473	1305451679	-

Sequences

CDS

Protein

Gene

>AfisC4G06980
ATGAAAAATTGGCTCCAAAGTAATTATTTTGAACAAATTTACTCCTTTCTCCTCAATAACCCACTCCCAGAAAAAAAATTCTCCTTAAAAACAACTACACGCGTACTTGTTTATATAATCAGAAAGCGAGAACAATAAGAGAAGAGAAAGAAGAAGAAGAGCAATCGCTGCTAATATCTTCACTGGTTTAAGAACGCTTGGTAATTACAAGCTTTCAAAACACTGTGATAACAACGAAGTCTTGAAAGCAGTTGCTGCTGAAGCCGGTTGGATTGTTGAAGAAGATGGTACTACTTACCGTAGGGTAATCTTCTTTCTTTTTCCTTCTAATATCTTCTTGGGCCTTTGTTCCTTAGGTATTGATTCGCTTTGATTGACATGGTAGATCTTTATTGTTTTATAATTTCTTTGGTTTTCTGCTTTCATGGAGTAGATCTGCCTTTTTTTAAATCAATTTGGTTTTTGGATTTAATTTTTTGTTGGATTTTTGTTCGAAGATTTCTATTTTTAATTCATGCATGGTATAGAATTTTGTATAGAATTTGTGTAATTTTTGAACATGTATTACTTTAATAGTTCATTACTAGTATTTCTTACTTTATAAATACATATGTTTAAAATAAAAATGCTGAAACAAGTAACTTAATCAATCCATGCTGATCTGATAGTTCCCAAGAATTTTGTTAATGATGGCCATACTGATATTTATGTACATCATAAGCATAGATGATAAACTGAAACAGCACAACCATACGGTTCATGCAATGTATTCAAACTATTGACATTCTTTCAGTGCAATTTCCGTGTGTTAGTCATTGATTCATTGCAGATTTTGTTTCTTCCTATGTTGTTTCTATGAACAAGTCTTAGACTATTTGTGTATTCTATATCCGGTGATTACTGGTTTCCTTATATTTAACAATCACAGTAGATATGTCTTTTTTATCTTATTTCCCGGCTATTAATACTTTATCGTTTCTTCTGTTGCAAGGTTGATATCTGATCCTTTGATCTTCATCAGTGTATTATACATCGTTGCATGTGTTATGTGTCTATCTTCTGTGCTTGCATGTATCGTCTGAGAACCAAGAATTACAACTACTCTGGGGGCTAACTGGGAATTCATCATTATCAGGACCAACCCTAGCTAATAGGTTGTACCCTAGATGAATGATCATATAAAATGGAAACATGAAGGATAAAAAATAATACTTGGTACAATTTTGAGGGGTTGAACTTGTAGAAAAACCTCAACTGCAACCTAAACCACTAAACCATTGATAACTGGCTAATGGATCGCGCCCTTAAGATAATCTGATTTGTCAATTTCTTCCTCGCCTTATTCATATTCATCGGATTCTTTGAATTCCAAATGGGAATTCTGTGTGTGTATTTGATGTCGTTCTTAATAGAACCATTCTTCCTCAGATGAGGAAGTTTTTTCCTCCGATGAAGAAGCTTTAGATTGAAGGATTTTCATGGCAAACTAAGGTTTAATTTAAAATTATGACGGAAAAGAATGAGCATGTGTCTGACTATCTGGATGTAAGTTATTTTAGTCAAAATGAATTAGTTTTGAATTTCAACAAACAAGAAAAGTAGCTTTTTTAAATCCATCCAAACAGACTGTAAATTATTGGAGTTAAATTTTCAAATCGTCCATTTAGAAGTTTTAAGTTGTTGAGGTCCGAATTACATGACAAACTAGGTTTTAGTTTAAGTATAATGGAATAAGGTCTGATCTTTAAATTGTTAATGACCGGTTTACAGTAATAAAATTTGCATATCACATAAATACGGATTAACTAGGGTGTTGCTTTTCCCCTGATAGATTACCCTAGCCAGCGGGTTTGCTTGTCTTACCCTTGGGTTGGGCCAGATCATTATTTTCTTAAATGTTTCATTTGGGATAAAAAAAAGTCAACTTTATGAATGAGGTGTACCAAGATTTCAGAATTTGAATCTAGGATAAAGACTAGGGTGAACTACATAATTCCACTCGTCTGCATGTGTCTGTTTGGTTATTCATCCTTTCATTTTACAATGAAAATTATTATTATGTTGATTTCCTCTCTTTCTTTCAGAAATATAGGCTTAGTGAAAATCTTCGAGCTCAGTCGACTGTTAGCCCTACCAAAGATGGTAAGGAAATGAACCCAAAATTCATCATTCGAAGTTTCAAAACTGGTAAAAATTATAGCACGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277207.1	2.5e-17	protein BZR1 homolog 1-like
Swissprot	Q9ZV88.1	1.6e-16	BES1/BZR1 homolog protein 4
trEMBL	A0A830BE32	5.2e-17	Protein BZR1 homolog

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50750.1	67.74	3e-20	93.2	BEH1	BES1/BZR1 homolog 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G06980	AT3G50750.1	62	20	20	81	33	94	67.74	3e-20	93.2
AfisC4G06980	AT4G36780.1	51	15	20	70	35	85	70.59	3e-18	86.7
AfisC4G06980	AT1G19350.6	51	15	20	70	41	91	70.59	1e-17	84.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF05687.10	BES1_N	Family	6	74	127.6	4.6e-37

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0016161	F	beta-amylase activity
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0040008	P	regulation of growth
GO:0048316	P	seed development
GO:0048481	P	plant ovule development
GO:0048831	P	regulation of shoot system development
GO:1904961	P	quiescent center organization

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network