result

Gene information

Detail information of AfisC4G07163

Location

Gene	Chr	Start	End	Strand
AfisC4G07163	chr4	1351497440	1351498607	-

Sequences

CDS

Protein

Gene

>AfisC4G07163
AAAAAACCCCCTAAAATCACCGTTTGCTGGATTGATTTCGACTTTCTGCTTCAATTTTTTGCAATCAATCTTGACATTATCCAAAACCCTGAATTCAACGACATCAATGACAACCACGTCGGAATCGACCTCAACAACTTGATTTCCAACATGTCCGCCCCTACCGGCTACTACGATGACACCACCGGTGCTTTCAATAACATAACCCTTATTTCCGGCCGGTCAGTCAATTCAAGTCTGGATCGATTACAATGGCACCAATATGAAGCTCGATGTCACTCTATCCTTGGTCCCAATGTCAAAACCTAAAAAACCCCTTCTTTCCACTGTTCTGGATCTCTCTAGCATTCTTCTTAAATCCATGTTTGTAGGAATGTCTTCGGCTATAGGACCTTTACAGAAGTCAGATTACATACAAGGATGGAGCTTCAACATGAATGGTGCAGCCAAAGCTTTAGATTATTCTAAGCTGCCTCCACTACCTAAACTACCTAAAACCAAAAACAAAGCGGCGCTGTTAGCAATATCTCTACCCATAGCAGCAACAATGCTGTTTCTTTTAACTACTGTTGCTATGGTGGTTGTAGTGAGGAGGAGGAAGAAATACACAGAGACAGTTGAGGATTGGGAGCTCGAGTATGGTCCACACAGATTTTCATACAAAGATCTGTACAAAGCTACAAAGGGATTTGTAAAAGATGGTTTACTAGGAGCTGGAGGGTTTGGGAGGGTGTATAAAGGCATATTGCCCACAACTAAAATGATGGTGGCGGTGAAGAAAGTATCGCACGAGTCAAGGCAAGGAATGAGGGAATTCGTAGCAGAAATCGTAAGCATTGGCAAGCTCCGCCATAGGAACCTCATGCAGCTACTAGGCTATTGTAGACATAGAGGTGAACTCTTATTAGTGTATGAGTACATGGCCAATGGAAGCCTTGATAGGTACTTATACCACAAAGATGAACCCACTTTGAATTGGGTTCAAAGGTTTAATGTAATTAAAGGGATTGCGTCGGGTCTTTTGTACTTGCATGAGGACTGGGAACAGCTTGTGGTACATAGAGACATAAAGGCTAGTAATGTGATGGTGGATGAAGGTTACAATGGAAAGCTTGGTGATTTTGGACTTTCAAGGTTGTACGGTATTTCTTCCTTTTGGTCCATCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256322.1	6.9e-105	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	6.9e-94	Protein SALT INTOLERANCE 2
trEMBL	A0A804KHR3	2.5e-104	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	58.22	7e-101	363	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G07163	AT3G53810.1	292	121	1	2	293	207	497	58.22	7e-101	363
AfisC4G07163	AT4G29050.1	291	129	1	2	292	204	493	55.33	7e-96	347
AfisC4G07163	AT2G37710.1	292	122	1	2	293	207	497	57.88	5e-94	341

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	2	71	50.8	1.5e-13
PF07714.14	Pkinase_Tyr	Domain	148	292	117.0	7.5e-34

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress
GO:0090333	P	regulation of stomatal closure
GO:1900425	P	negative regulation of defense response to bacterium

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network