result

Gene information

Detail information of AfisC4G07223

Location

Gene	Chr	Start	End	Strand
AfisC4G07223	chr4	1364169607	1364173918	+

Sequences

CDS

>AfisC4G07223
ATGGTTCCGTTAATGCTCGTATTCTTCCTGCTGCCGACGTTGCTGGTGCTGACGGTGGCGGCGCTGGGGCTGAAGCTGAGATCTTCGTCGGTGGGCGAGGATTATAAGAAGAAGGGGATGAACTTGCCTCCTGGGAACATGGGTTGGCCGTTGATCGGAGAGTCGCTTGCGTTCAGGCGCCTGCATCCTTGCGTTTCTCTCGGGGAGTACATGGAAGATCACATTAGAAAGTATGGTAAAATTTACAGATCACACTTATTCGGACAACCAACCATAGTTTCAGCAGATGCAGAGCTGAATAGATTTGTTCTTATGAACGACGGAAAGCTGTTCGAGCCATGTTTTCCAAAGAGTGTAGCTGATATTTTAGGAAACACTTCTATGCTTGTAATCACTGGTGAAATGCACAGATACATGAAGTCTCTCACTGTAAATTTCATGGGCATTGCGAAGCTTAGAAACAATTTTCTTGGTGACTCCGAGATGTATACCATGGAGAATTTCAATACCTGGAAGGATGGTGTTGTCTTCCCCGCTAAAGAAGAGGCTTCTAAGATAACATTTAATCTGATGGTGAAGAATATATTGAGCATGAATCCAGGTGAGCCTGAAACGGAGCAGCTTAGGCATCTGTACATGTCCTTTATGAAGGGTGTTATTTCTCTTCCTCTTAACTTCCCTGGAACTGCTTATAAGAAAGCCATGCAGGCAAGAGTCAAAATATTGAAAACAATCGAGCAACTGATGAAAGAAAGGATCGAAATGAAAAAGGCAGGAAAAGATAAAATCGGAGAAGGAGACCTTCTAGGCTTCGTTCTCGAACAGTCAAACCTCGATGCTGAACAGTTTGGAGATCTCTTGCTCGGTTTGCTCTTCGGTGGTCATGAGACATCTTCCACCGCCATAACTTTAGTTCTCTATTTCCTCCATGACTGCCCAAAAGCTGTTCAGCACCTTCGAGAGGAACATCTAGCTATATTAAAGCAGAAAAAAGCTAGAGGGGAGCCACGAGCGCTGACTTGGGAGGACTACAAGCATATGGAATTCAGCCAATGTGTTGTGAGTGAGACTCTTAGACTTGGAAACATTATCAAATTCGTTCAGAGAAAAGCAGTTACCGATGTTAAGTTCAAAGGGTATGATATTCCGGAAGGATGGGGGGTGATTCCAATATTTGCAGCTGCTCATCTTGATTCTAATGTATATGAAAACCCTCAGAAGTTTGATCCATGGAGATGGCTGATGATATCATCGAGTACAGCAAGGATAGACAACTACATGCCCTTCGGACAAGGGCTCAGAAACTGTGCAGGCTTAGAGCTGGCCAAAATGGAGATAGTGGTCTTTCTTCACCATTTGGTTCTCAACTTCGACTGGGAAATGGCTGAGCCGGACCACCCTCTTGCCTATGCCTTTCCAGAGTTCGAGAAGGGTCTTCCCATCAAAGTTCGTAGGATCTCCCTTATCGATTACTGA

Protein

Gene

>AfisC4G07223
CTCGTTCTCTTTAATTCCAAACCAAGTACTACCAAAAAAGGGGAAGAAAATGGTTCCGTTAATGCTCGTATTCTTCCTGCTGCCGACGTTGCTGGTGCTGACGGTGGCGGCGCTGGGGCTGAAGCTGAGATCTTCGTCGGTGGGCGAGGATTATAAGAAGAAGGGGATGAACTTGCCTCCTGGGAACATGGGTTGGCCGTTGATCGGAGAGTCGCTTGCGTTCAGGCGCCTGCATCCTTGCGTTTCTCTCGGGGAGTACATGGAAGATCACATTAGAAAGTAATTTTTGTTCTTTGATTTTATTGTTTATACACACTCTAATCATTTTACTTTATAACGTTTCTTAAGGGTTAACAAACTGTATCTTTTAGTGTCTAATATATGTTCCTATTAGGAGGTGTTAGCAATATATTATAGGGTGCAACAACTCTTAATGAAACAAATTTTCTATCTATGCATCCGCAGAAAATTTATTTATGCCTTATGTGGAATTTACTGCAATAATTTTTGAATTAACACATGGCATGTGGTAAATTTATTTATATCCAATCCTTCTTTCTACATTGTTTTATTTTCCACTAAAATCATAATTACAGTACGTATTATCTTAATTATGTTTGTTATTGAATTTATATCTCAGTAACTTTTGTGATAAAATTTTCATTGATTGGAGTCATTTAAATGTAATAAACAAGTTTTGAATTTAATATTAAACTGTGCTATTTGATATAAAGTTTTCTTGTGGTAAAAAAACTTGCCTGTAAATTACTTGTATTAAACTATTAACTATAATACAATTTCGAATCAAGTTACAATAGTGATTATAAGATATGATTCAAACATGATAATTACATTTTTAGAAGAAAAGTAATATAATAAATCAGTAAAAAAAATGTAATGAATAAAAAATATGTTAAAAAGACTATCAAAATACCAATTTTTATTGTTGAATTTGTATCTCAATAACTTCTGTGACAAAATCTTCATTGATTAGAATTATATAAATGTGATAAATATGTTTTGAATTATTACTGTTTGCAAAATATATATTAAAATATATTACTGTGAATTATTTATTTTTATTGCAAAATTCATAAAGCTAGATTAATATTAAACTGTGCTATTTGTTATAAAATTTTCTTATTTGGTAAAAAAAAAAAACCATGTAAATTAGAAATGTTAAACTGATTATATCTTAATGCAATTTTGAAATGAAGAAAGTGATGTAAGATATGATTAAAACATGATAATTACATTTTTAGAAGAAAAGTAATCGGATGAACCAGTAAAAAAATGTATAAGATTATCAATATACGAATCTGAAAGTAAGAGATGTTATTATTATTATTATTTTGGGAAATTGAACCAAGATCACAAACACTTTTTAAATTTTCAATCACCTGGACCAACCAACCAAACCAATATACCAATTGTTTTATTTTTGCACTTGCATATTAGATAAAGGCGTTTATAATAATTGTTGAGTTTCGACATTTCCGCGTACCGTACGCATTCGCTTCACCATGTCTAGCCGAGGTCAACAGTTGAAGTCTCTTATGCCGGCGTCCCGATTGAACATCCCTCCATCACTTACCATCGGACATATAATTTGGTCTTGACAACACATTGTAACAAAAGGAATTTCCACGCACCCACTCCATTTACAATGCGAGCCACACCTAACAATAATTTCAGAATAGAGCTTATTTTGGTAGTATGTTTCACATAAGGTCTAAAACTTGTACTTAGTTTTTTTGGAGATCCTTAGGTAGAAAATTTAAAGACATAATGTTAGTTAGATCGTGCACTGGGTTCCATTGTAGTTTTTTCTTTGGTCTCGCAGTTCGAAACCATCAACCAACCGAGCTTATCTGTAGGCAGGTTTATACTTATCAGTATATGGCCTTCATTTAAACTTCAATAACTTGTTAAAATAGTACACTAATCAATTACATGTTATAGTCTTCATTAATAACAACATATAACAATGCTATGCAGGTATGGTAAAATTTACAGATCACACTTATTCGGACAACCAACCATAGTTTCAGCAGATGCAGAGCTGAATAGATTTGTTCTTATGAACGACGGAAAGCTGTTCGAGCCATGTTTTCCAAAGAGTGTAGCTGATATTTTAGGAAACACTTCTATGCTTGTAATCACTGGTGAAATGCACAGATACATGAAGTCTCTCACTGTAAATTTCATGGGCATTGCGAAGCTTAGAAACAATTTTCTTGGTGACTCCGAGATGTATACCATGGAGAATTTCAATACCTGGAAGGATGGTGTTGTCTTCCCCGCTAAAGAAGAGGCTTCTAAGGTATATTTTTTTGTGATTAGCTTTTAGGTAGCTTTTCAGAATATGGAGAAGTAAGGATTTTAAATTGATTTGGTTGTTTGCAGATAACATTTAATCTGATGGTGAAGAATATATTGAGCATGAATCCAGGTGAGCCTGAAACGGAGCAGCTTAGGCATCTGTACATGTCCTTTATGAAGGGTGTTATTTCTCTTCCTCTTAACTTCCCTGGAACTGCTTATAAGAAAGCCATGCAGGTATTAATACTACCGGCCCATCTTTAATGTTTCAACTTTTAAGTGGTATAAGTGAATAATAAAAAGTTGAAGCCATGCAGGTACTGATACTATGAGCCCATCTTTAATATTGGTTTAGCTTCGCTGTTTGTTACTTTCTGTGACTACTTAAGTATTTTAAGTAGTTTAACTGAATTGTAAAAATGAAAGTGTTTTGGATGAAAATATGGAAATATTTACAAAATTTATTTGTATAATATAGGTTATAAGCAAGTTTTTATAACTTATTAACTTGTCTGTACTTTAAAGCCAAAACATTAAGTTAAATGTTAGTTTTTATAACTACTAAAATGTTTTCTATTAGGAGCTTTTATAGTCTGATTAAATCGTAAAATGTAGAAATATGTGGATGGAAATCCAGAAAGTTTGATTGAAATTTAATTATAAAGGAAGAAATAGTTCATGAGCAAGTTTTTCTTTCTTATATATATATCTTATTAACTCATTTATTATTATTCAATCAATACTACTTAAAAGTCTCCATTCAAAACCTTTTCAAGTTACTTTCAATAATTAGTTACTAAAGTCAAACTATTAAGTTGTTGTCAAACATTTTAAAATTACATAAGTATCTTCACTATATATATTAGCAATCTTTGAGGGTCTTTGTTCAATTGACTATCCTTGCATTCTCTTCTTATAAGCAATCTAACGTTATGCATGTAATTACTGAAGGCAAGAGTCAAAATATTGAAAACAATCGAGCAACTGATGAAAGAAAGGATCGAAATGAAAAAGGCAGGAAAAGATAAAATCGGAGAAGGAGACCTTCTAGGCTTCGTTCTCGAACAGTCAAACCTCGATGCTGAACAGTTTGGAGATCTCTTGCTCGGTTTGCTCTTCGGTGGTCATGAGACATCTTCCACCGCCATAACTTTAGTTCTCTATTTCCTCCATGACTGCCCAAAAGCTGTTCAGCACCTTCGAGTAAGTAAATAACTGTTACTTAAGCTACATTACTATTGTAAACACTAGGTACATTTTCTGAAGATACTGTTTTCATAGGAGGAACATCTAGCTATATTAAAGCAGAAAAAAGCTAGAGGGGAGCCACGAGCGCTGACTTGGGAGGACTACAAGCATATGGAATTCAGCCAATGTGTAATCATCTTCAGTCTTCAGTCCTTCATTATACCATACGTACCATACATATAACATAATATATACATGATTGAAATGCATATATGTAAATATAGGTTGTGAGTGAGACTCTTAGACTTGGAAACATTATCAAATTCGTTCAGAGAAAAGCAGTTACCGATGTTAAGTTCAAAGGGTATGATATTCCGGAAGGATGGGGGGTGATTCCAATATTTGCAGCTGCTCATCTTGATTCTAATGTATATGAAAACCCTCAGAAGTTTGATCCATGGAGATGGCTGGTCAGTTACCCTACATTTCTCTTTATGAAATATGTGTGTGTGTATTATAGATGATATTCTGGACATTAACCATGGATTTTTGCTTGTATATTGTGCAGATGATATCATCGAGTACAGCAAGGATAGACAACTACATGCCCTTCGGACAAGGGCTCAGAAACTGTGCAGGCTTAGAGCTGGCCAAAATGGAGATAGTGGTCTTTCTTCACCATTTGGTTCTCAACTTCGACTGGGAAATGGCTGAGCCGGACCACCCTCTTGCCTATGCCTTTCCAGAGTTCGAGAAGGGTCTTCCCATCAAAGTTCGTAGGATCTCCCTTATCGATTACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257909.1	6.3e-241	cytochrome P450 90B2-like
Swissprot	Q5CCK3.1	3.1e-152	Steroid 22-alpha-hydroxylase
trEMBL	A0A5P1FGW1	4.5e-241	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	51.77	8e-149	523	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G07223	AT3G50660.1	481	201	4	36	486	33	512	51.77	8e-149	523
AfisC4G07223	AT5G05690.1	447	257	5	40	485	29	467	40.49	9e-93	337
AfisC4G07223	AT1G73340.1	488	282	7	29	485	30	506	33.61	7e-85	311

Ortholog group

Species	Genes
Allium cepa	g513323.t1
Allium fistulosum	AfisC4G07223
Allium sativum	Asa5G06006.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	43	466	214.0	3.1e-63

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005506	F	iron ion binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0055114	P	oxidation-reduction process
GO:0009647	P	skotomorphogenesis
GO:0009687	P	abscisic acid metabolic process
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010114	P	response to red light
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010295	F	(+)-abscisic acid 8'-hydroxylase activity
GO:0010584	P	pollen exine formation
GO:0016125	P	sterol metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0020037	F	heme binding
GO:0044444	C	cytoplasmic part
GO:0048366	P	leaf development
GO:0048441	P	petal development
GO:0048657	P	anther wall tapetum cell differentiation
GO:0048838	P	release of seed from dormancy

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09587	CYP90B1, DWF4; steroid 22-alpha-hydroxylase	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network