Detail information of AfisC5G00212


Location
GeneChrStartEndStrand
AfisC5G00212chr53451537934529326+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008799528.14.2e-295homeobox-leucine zipper protein ROC5
SwissprotQ6EPF0.15.5e-260Protein RICE OUTERMOST CELL-SPECIFIC 5
trEMBLA0A8B7CI163.0e-295homeobox-leucine zipper protein ROC5 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G00730.162.710.0 964AHDP;ANL2Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain10415968.52.9e-19
PF01852.16STARTDomain305530167.81.9e-49

Gene Ontology
AccessionOntologyName
GO:0044183Fprotein binding involved in protein folding
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006457Pprotein folding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0008289Flipid binding
GO:0009828Pplant-type cell wall loosening
GO:0009845Pseed germination
GO:0009913Pepidermal cell differentiation
GO:0010091Ptrichome branching
GO:0042335Pcuticle development
GO:0043481Panthocyanin accumulation in tissues in response to UV light
GO:0048497Pmaintenance of floral organ identity
GO:0048765Proot hair cell differentiation
GO:0048825Pcotyledon development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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