result

Gene information

Detail information of AfisC5G00223

Location

Gene	Chr	Start	End	Strand
AfisC5G00223	chr5	38040000	38041032	+

Sequences

CDS

Protein

Gene

>AfisC5G00223
ATGTCAAGTTCATCCAATAATAATACCAAAACCTCTGGTACAGATAGCATCTCTTCTACAGGCATAACTGCTGTCATCCTCAGTAAGTCAAAACATAAAAATATGCTTACTTTTTTTTCAATAATGTTATATAAATTATTTCTCATTTCTATGTCGACAATTATAACTTTGGCAGTTGCGGGCGCAATAGTACTAATGGTTGTTGCTTTTTTAATAAAAAAGTATTGTTTAAAAAGGAAGAGTTTCTCGAACAGTATTACTGGTGCTGAAACCACCCATGTAGAATCAAAAGTCAAACTTGCATCAACAGAGAACTTTTTAGATGGACTCATGAAAGAAAAAACCAATCAGGTTTTAGCCCATAGAATCTAATAGAGTTCACATATAGTTACACAATCAAATTGGATTCAGGTGGATTAAATGAAGTGTACAAAGGAAGATTTCCAAATGGGACGCATAAAGTAGTTAAAGTACTTCATAAAACATTAAATAAAAGCACAGAAGAACAGTTCATGGCAGAAGTCAGTACAATTTGAAGAACATGTTGTATTACTCTATTTAAACTTTATAGGTTCTATTTCAAGATACGACAAAAGCATTGGTATACGAGTATATGGAAAATGGATCACTAAACAAGTACTTGTTCAATAAAGTGAAAAACATACCATGGATGACACTTCAGGTTATTGCAGTTAGTACAGCAAAAGGTCTACGATACCTGCATGAAGAATGCCAAAGAAAAATAATTCATTATGACATTAAACCATGTAACATTCTTTTACGAGAAGATTTATTACCAAAAGTAGCTGACTTTGGATTGAAAAAATTGTGTGATAGTGAAAAAACACATGTAGTAGTAACTAGGGAAAAAGGAACACATGGTTATGCTGCACCAGAAATGTGGATGTCATTTCCTGTAATGCGCAAATGTGGTATGTACTGTTTTGGTATGCTTTTGTTTGAGATATTAGGGAGAAAAAGAATCGTGAATTCAACAATACTAAAAACAGAGAATGGTTTCAGATGGGTGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_017696039.2	3.0e-47	rust resistance kinase Lr10-like
Swissprot	Q9FLV4.1	5.6e-30	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080
trEMBL	A0A6I9QS05	2.2e-47	rust resistance kinase Lr10-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24080.1	48.91	4e-32	134		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00223	AT5G24080.1	137	66	2	90	223	193	328	48.91	4e-32	134
AfisC5G00223	AT4G18250.1	158	84	4	89	239	584	741	42.41	6e-30	127
AfisC5G00223	AT1G66980.1	136	75	2	90	222	869	1004	42.65	1e-29	126

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	90	226	90.9	7.5e-26

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0006968	P	cellular defense response
GO:0009506	C	plasmodesma
GO:0019901	F	protein kinase binding
GO:0031625	F	ubiquitin protein ligase binding
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network