Detail information of AfisC5G00247


Location
GeneChrStartEndStrand
AfisC5G00247chr54252774142541986+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275616.14.8e-142probable serine/threonine-protein kinase At1g54610 isoform X1
SwissprotF4ICB6.14.1e-130Protein IMPAIRED IN BABA-INDUCED STERILITY 1
trEMBLA0A5P1EFW93.4e-142Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G18670.175.009e-135 476IBS1Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain123342211.41.3e-62

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000979FRNA polymerase II core promoter sequence-specific DNA binding
GO:0001223Ftranscription coactivator binding
GO:0002944Ccyclin K-CDK12 complex
GO:0003682Fchromatin binding
GO:0009615Presponse to virus
GO:0005829Ccytosol
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005524FATP binding
GO:0005703Cpolytene chromosome puff
GO:0005730Cnucleolus
GO:0006282Pregulation of DNA repair
GO:0006367Ptranscription initiation from RNA polymerase II promoter
GO:0006368Ptranscription elongation from RNA polymerase II promoter
GO:0006909Pphagocytosis
GO:0007346Pregulation of mitotic cell cycle
GO:0008024Ccyclin/CDK positive transcription elongation factor complex
GO:0008283Pcell proliferation
GO:0008353FRNA polymerase II carboxy-terminal domain kinase activity
GO:0042493Presponse to drug
GO:0010613Ppositive regulation of cardiac muscle hypertrophy
GO:0016605CPML body
GO:0016607Cnuclear speck
GO:0019901Fprotein kinase binding
GO:0022008Pneurogenesis
GO:0030332Fcyclin binding
GO:0031297Preplication fork processing
GO:0033129Ppositive regulation of histone phosphorylation
GO:0040018Ppositive regulation of multicellular organism growth
GO:0042795PsnRNA transcription from RNA polymerase II promoter
GO:0043405Pregulation of MAP kinase activity
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0046579Ppositive regulation of Ras protein signal transduction
GO:0046777Pprotein autophosphorylation
GO:0048366Pleaf development
GO:0050434Ppositive regulation of viral transcription
GO:0051147Pregulation of muscle cell differentiation
GO:0070374Ppositive regulation of ERK1 and ERK2 cascade
GO:0070816Pphosphorylation of RNA polymerase II C-terminal domain
GO:0071157Pnegative regulation of cell cycle arrest
GO:0071345Pcellular response to cytokine stimulus
GO:0090277Ppositive regulation of peptide hormone secretion
GO:0097322F7SK snRNA binding
GO:1900364Pnegative regulation of mRNA polyadenylation
GO:1903839Ppositive regulation of mRNA 3'-UTR binding
GO:2001168Ppositive regulation of histone H2B ubiquitination

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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