result

Gene information

Detail information of AfisC5G00393

Location

Gene	Chr	Start	End	Strand
AfisC5G00393	chr5	74227423	74230633	+

Sequences

CDS

>AfisC5G00393
ATGAAATCTATGAGCAATAATAACAGTAATAATTGGTTGGGATTCTCTCTTTCACCTCAAATTAGCATGGATCATGCATCTTCTGAATCAAATCACCATGGATTATGCTATGATCAAGGAGAAAATGCAGAGCTTTACTCACAGTTATCCCTCATGCCTTTGAAATCAGATGGCTCTCTTTGCTTAATGGAAGCTCTAACAAGATCACAGCAAAACCATGTTCAAGGGATTGCTCCATCTCCTTCTCCAAAACTAGAAGATTTTCTAGGTGGTGGTCCAAATAATAACATTGGGGTCCATAATAACTACGAGAACAATGACAAAGAAGTAGCAAATAATATGTACTACTACCAACAACAACAACAAGAATATAGAAATAGTAACGCATATTATCAGCCTATACACGACGAAATATATCATAACTTTTATAGTGAGATTGATGGAAGCTCAATCGGTGGACTTGGTTATGGTGATTTGCATTCTTTGAGCTTGTCTATGAGTCCTGGTTCTAAACCGAGCTCCGTTACACTACCACACAATTATAGTGTATCAAATGTTGGAGTTAATAACAATGATGGTATGGCTTTGGATGTTGTTGCAAATAAGAAGAGAGGTAGTGGAAAGGGTGGAGCAAAGCAACCGATTCATAGAAAATCGATCGATACATTTGGGCAAAGAACTTCTCAATATAGAGGTGTCACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTTTGGGATAATAGTTGCAAGAAGGAAGGACAAACTAGAAAAGGAAGGCAAGTTTATCTTGGGGGTTATGATATGGAAGATAAGGCAGCAAGATCCTATGATTTAGCTGCATTGAAGTATTGGGGGCCTTCCACTCATATTAACTTTCCATTGGAAAATTATCAAGAAGAACTCGAAGAAATGAAGAGTATGAGTAGGCAGGAATACGTTGCACATTTGCGAAGAAATAGCAGTGGATTTTCTCGAGGGGCCTCAATGTACCGAGGAGTAACAAGGCATCATCAACATGGAAGATGGCAAGCTAGAATTGGAAGAGTTGCTGGAAACAAAGATCTCTACCTTGGAACTTTCAGCACTCAAGAAGAAGCAGCAGAAGCTTACGATGTGGCAGCAATAAAATTCAGAGGAGCAAGCGCAGTTACAAACTTCGACATAACAAAATACGACGTAGAGAAGATAATGGCAAGCAACAGTCTTCTTTCAGGAGAACAGGCTCGTAAATCTAAAGCTGCTCCTTCTATTCAGAACACAAACGTTGAAAACAACAATAACAATAACAATAGCAATAGCAATAACAATGATATTGTTCTTTACAAACCTCAAGATGGAACACTTGAACAAAACTTACCGGTCTCTGTAGCATTTAATGGGCTGAATGGTGCGCATATTTCAGAGTCATCTTCACGTGTAACTAGCTTGAATAGCTCAAGAGAGGAGAGCCCTGACCCCAAGTTTTGTGTTAGTGCAAGTCCACTGGCTTCTTGGATGTCTACGGATCAGATAAGGCCTGTTATCTCTATGTCCCATATGCCCGTTTTCGCTGCATGGAGTGATGTTTAG

Protein

Gene

>AfisC5G00393
GTTGTCCAGATATTGTTAGAATTTTATAGAAGAAGAATGAAATCTATGAGCAATAATAACAGTAATAATTGGTTGGGATTCTCTCTTTCACCTCAAATTAGCATGGATCATGCATCTTCTGAATCAAATCACCATGGATTATGCTATGATCAAGGAGAAAATGCAGAGCTTTACTCACAGTTATCCCTCATGCCTTTGAAATCAGATGGCTCTCTTTGCTTAATGGAAGCTCTAACAAGATCACAGCAAAACCATGGTTTGTTTCTTTAAACTTTTAAGTACATATATTGCCTTGTTTAATATGTACTTAGCTTACATATGCATTATTCATATTTTGACTTTTAGTTCAAGGGATTGCTCCATCTCCTTCTCCAAAACTAGAAGATTTTCTAGGTGGTGGTCCAAATAATAACATTGGGGTCCATAATAACTACGAGAACAATGACAAAGAAGTAGCAAATAATATGTACTACTACCAACAACAACAACAAGAATATAGAAATAGTAACGCATATTATCAGCCTATACACGACGAAATATATCATAACTTTTATAGTGAGATTGATGGAAGCTCAATCGGTGGACTTGGTTATGGTGATTTGCATTCTTTGAGCTTGTCTATGAGTCCTGGTTCTAAACCGAGCTCCGTTACACTACCACACAATTATAGTGTATCAAATGTTGGAGTTAATAACAATGATGGTATGGCTTTGGATGTTGTTGCAAATAAGAAGAGAGGTAGTGGAAAGGGTGGAGCAAAGCAACCGATTCATAGAAAATCGATCGATACATTTGGGCAAAGAACTTCTCAATATAGAGGTGTCACAAGGTAAGAACTTAGAAATGTGACATTTTACAGTAGTAGTGTAATATAATGAGCTCAAAATGATAAATAGTATGTATGATTTAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTTTGGGATAATAGTTGCAAGAAGGAAGGACAAACTAGAAAAGGAAGGCAAGGTTAGTAAGTAGATCATCATAGATGAATATCTAGGTTTTTTTTCATTTATTTTGAGTGAATTACTTACATTGTATGCTATATTTGACGTCTCTTCGTTTTCACATGTGTCTGCTTTGGGGAAACAATGATGCAGTTTATCTTGGTAAACACATACTTTCATCAATGGTCATTATCTTATTTTACGAATCAATAAAGTTTATCTAATCTTTTCATTAATGTATTATTTAGGGGGTTATGATATGGAAGATAAGGCAGCAAGATCCTATGATTTAGCTGCATTGAAGTATTGGGGGCCTTCCACTCATATTAACTTTCCAGTATGGTTTTATTTATGTTTTGAACATTCTGCCTTTAATCTTCGTATTTACACTAACTAACCTGCGATGACATTATAGTTGGAAAATTATCAAGAAGAACTCGAAGAAATGAAGAGTATGAGTAGGCAGGAATACGTTGCACATTTGCGAAGGTAATTAGTTAACTAAGGATAATGTCCATTTCACATTATTATGACAATGATATCCTTTTCTTAACTAACTAGCTATTTGATGTTTCCAATTCCTGTAGAAATAGCAGTGGATTTTCTCGAGGGGCCTCAATGTACCGAGGAGTAACAAGGTTATTAATTTTATTAATATTGATGCTTAAGTACCACATAAAATTAGACTCCATATATAAATTTTTCTTTCACATATATTTACTTTGTTCATATGATATATTAGGCATCATCAACATGGAAGATGGCAAGCTAGAATTGGAAGAGTTGCTGGAAACAAAGATCTCTACCTTGGAACTTTCAGTAATTTTCTGAATACTTCACTAGTAATATTATTCTAAGTTTCAAACTTAAAATGCTGAAGTCAAATTAATGACAGTTTGCCAGTAAAGATAAAAGAGCATTTCATTAGTATATTCAGAACATTCCGGTTAAACCATTTGCTTTATTTCATGATTTGCACTTTGATCACACTATACCGAATTTCAAAATATCGATAGCACTTTTTCTTCCTTTTACGTACCCTGCAAAAATTCAAATTCTTTCCTTTAAGTAAAGCTGCATTCTTTGCTGGTCGTAAAATTCATTGGTTGACAGATTCAACTCTTAAAACCACCAGTACAAAGTGCATAGAATATTTAGTACCACTTTGAAATCAATAAAAAAACTCTTTAAAGTTTCTTGATTATCAAATGCCTGGTATAGCATGTTAATTGTTAATTGAGTTACAACAACTTAAAGGTTATAACTATAGAACTGCATACATTTTCACTTTAAGGCTTAGTTTGTTTCCCATTTGAAAAATGCTTACAAACACTGATTGTAACAAGATATTTATAAATAACTCTTGATTATACAGCAAAAGGAGTCTGCATTATTAGCTTATATCTGTGCCAAAATGAAGATTGTACAATTTTAAACCCTATCAAAACCCTGAATTCAAAATTCAATCAATAGTATTTTTGTACAAGATACTAATAGTAAAGAAACACATTTAAAAATCAAAAGCAAACAGCATTCAACAATTACTTCTTTCTCGAAACAAATACAATTCTTGAACATGTTTCTTTTTTTAAAGGCACTCAAGAAGAAGCAGCAGAAGCTTACGATGTGGCAGCAATAAAATTCAGAGGAGCAAGCGCAGTTACAAACTTCGACATAACAAAATACGACGTAGAGAAGATAATGGCAAGCAACAGTCTTCTTTCAGGAGAACAGGCTCGTAAATCTAAAGCTGCTCCTTCTATTCAGAACACAAACGTTGAAAACAACAATAACAATAACAATAGCAATAGCAATAACAATGATATTGTTCTTTACAAACCTCAAGATGGAACACTTGAACAAAACTTACCGGTCTCTGTAGCATTTAATGGGCTGAATGGTGCGCATATTTCAGAGTCATCTTCACGTGTAACTAGCTTGAATAGCTCAAGAGAGGAGAGCCCTGACCCCAAGTTTTGTGTTAGTGCAAGTCCACTGGCTTCTTGGATGTCTACGGATCAGATAAGGCCTGTTATCTCTATGTCCCATATGCCCGTTTTCGCTGCATGGAGTGATGTTTAGTTATGCCTAGTGTCAGTGTATGGAGGAGTTATGTAGGATTGGCTGTATCTTTTTCTTTTCTTAACTTATGGTTGCAATTGTTTTTTATGATGATTTTAGTCACTTGTAGCTGTAGTTGAAGTTGTAACACTAGTTTCTAGCTATTGGTAAGAGAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257848.1	2.5e-150	AP2-like ethylene-responsive transcription factor ANT
Swissprot	Q38914.2	7.5e-112	Protein OVULE MUTANT
trEMBL	A0A8B9AA85	3.0e-150	AP2-like ethylene-responsive transcription factor CRL5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G37750.1	46.54	1e-127	453	ANT;CKC;CKC1;DRG	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00393	AT4G37750.1	593	208	14	1	523	1	554	46.54	1e-127	453
AfisC5G00393	AT1G72570.1	252	72	2	162	413	164	407	68.25	2e-100	363
AfisC5G00393	AT1G51190.1	432	153	11	8	422	2	384	49.31	2e-97	353

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	228	287	44.3	1.5e-11
PF00847.17	AP2	Domain	332	381	39.4	4.7e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000723	P	telomere maintenance
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006110	P	regulation of glycolytic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007389	P	pattern specification process
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009734	P	auxin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009744	P	response to sucrose
GO:0009873	P	ethylene-activated signaling pathway
GO:0010073	P	meristem maintenance
GO:0010187	P	negative regulation of seed germination
GO:0010449	P	root meristem growth
GO:0019432	P	triglyceride biosynthetic process
GO:0019827	P	stem cell population maintenance
GO:0040008	P	regulation of growth
GO:0045723	P	positive regulation of fatty acid biosynthetic process
GO:1901959	P	positive regulation of cutin biosynthetic process
GO:1904278	P	positive regulation of wax biosynthetic process
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network