result

Gene information

Detail information of AfisC5G00495

Location

Gene	Chr	Start	End	Strand
AfisC5G00495	chr5	94611216	94612963	-

Sequences

CDS

Protein

Gene

>AfisC5G00495
GATCTTCCATATTCACTTCTATTCATTTATTATCTTCTTCTTCCAACTTCTCCAGTTTCTCAATAATATATCTGATCGCTTGTAATGGATTCTGTTTCAGCGTCTGAGCATCTGTGTTATGTTCGCTGTGCCTACTGTAACACCATCCTTGCGGTATATATACAGTTAGCTTTAAATGCATTGTTTATAATCTGTAATTTAAATTACTGCAAAATACACATCTATTATTCATGTGAAGGAAAAGTTAGATAATGAAACACAAAATTTTAACATGTTATATGTAATATTAACTGAAGAATGCACTACTTGCAGGTTGGAGTTCCATGCAATAGGTTGACGGAAACTATAACCGTGAAATGTGGTCACTGCAACAACTTATCTCTCCTCAACCCCAGTCGTTCTTTGAATTACTTTGCTAATGGTAGTAATGCTAATAATATTATTGCTAATAATAACAATATTCAAACTCAATGCAGTGACCAATTAGGGCTGGTTCAGGTATATTTCTCGTACTCATATGAGTATAACACCTATAAAAACAATCAATAATAACAGTGCATATGTTCACATTCAATACATCCAGAAAATTGATAAAACATCAAATTAGAACCTACATTTCATCGAAGGGTTATACGGCTAACTCAATAAATTGATGTGATTAATTAGGATCCCAACAGTGATACGAGGAGAGGACAAAATTCATCATCATCGTCATCGACATCTAATGATCAAACCGATTCAAATGCACCATATGTTGTTAAACGTAAATATCTTTTACGGCTAAATTTTATTTCATTATGTTGCCAATACTTACTGTCAAATGAGTATCCTTTTATTACTGTATAATTATGATTTTGTTTGACATGGCAGCACCAGAGAAAAAACATCGCCAACCGTCTGCATACAACCATTTCATGAAGTGAGATTTTTATCCAATTTATTTTATTTCGCATATATAAATTATAAACAGGGTTTAAGAATCTACAATTGTGCATTTGAAGAATTAATTTAAAAAAAAAAAGTTTTTCTACGTAGTAAGGCAATAGACAAAAAAGATACTAACATTGATCTTCAAGGAAACAATCATATAACTGAAGATTTGGAATCAAAATTATGTGCAGGGAAGAAATACAGCGAATAAAAGCGGTTAATCCAGGAATGCCTCACCGTGAAGCCTTCAGCATGGCTGCAAAGAACGTATGAACAGAACTTCAACTATGAAGAAATTAAAATTAGATTTGATTGTGCTATTATACTAACCTCATTATTGTATTGCAGTGGGCAAAGTATGAACCTCGCCCCAATACTCCGGCATATGATAGCAGTAATAGTTCTCCAATAAAACAGACAAGTGGTCTTCATGTAAGTTCAAGCAAAATCAGTTTCTCTATCTTCTGAATCAACAGGTTATATAACAAAATAGAATTAAAAGAAAGATCAAATGAAAGTAAATGTTGATTTGTCATAATGTATTTTCTGGTCATGCAGGGAAAAGGAGGTGATATTTTACCTGCAGAAGGTAGCTTCAACCTTTTCAAGGAAATGGATCACAAGGGGACTTTTAAGAACAACTAACTTTTGTTTCAAATATTTGTATTTCATAGTACAGATTGTAGGTGAATGCCTGTTTGTATTTGATTTATGCCATTTTCTTTATGAAATCCGCTTAAGGAACAAGTATTATTTGTAAGGATTTTCTGCATCTGTACCCTACATCTTCAATTTGAAAGATGATATGAGTGTTTCAA

Functional annotation

Database	accession number	e-value	annotation
nr	ADI58463.1	2.6e-45	drooping leaf
Swissprot	Q76EJ0.1	1.2e-44	Protein CRABS CLAW homolog
trEMBL	D7RNZ7	1.8e-45	Drooping leaf

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69180.1	50.79	3e-36	148	CRC	Plant-specific transcription factor YABBY family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00495	AT1G69180.1	189	58	4	7	190	18	176	50.79	3e-36	148
AfisC5G00495	AT1G08465.1	162	68	5	6	163	6	153	46.91	4e-30	127
AfisC5G00495	AT2G26580.2	162	72	3	2	163	3	146	44.44	7e-30	127

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04690.10	YABBY	Family	6	163	178.8	1e-52

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0009653	P	anatomical structure morphogenesis
GO:0009944	P	polarity specification of adaxial/abaxial axis
GO:0010022	P	meristem determinacy
GO:0010158	P	abaxial cell fate specification
GO:0048440	P	carpel development
GO:1902183	P	regulation of shoot apical meristem development
GO:2000024	P	regulation of leaf development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network