Detail information of AfisC5G00566


Location
GeneChrStartEndStrand
AfisC5G00566chr5109775065109775825+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244430.12.5e-20zinc finger protein ZAT6-like
SwissprotO22533.11.3e-08COLD INDUCED ZINC FINGER PROTEIN 2
trEMBLA0A8D4JK901.8e-15Bsr-d1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G27730.141.761e-25 112STZ;ZAT10salt tolerance zinc finger

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag465718.t1
Allium fistulosumAfisC5G00566
Allium sativumAsa0G00322.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain275152.43e-14
PF13912.3zf-C2H2_6Domain769944.31e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009737Presponse to abscisic acid
GO:0009793Pembryo development ending in seed dormancy
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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