Detail information of AfisC5G00573


Location
GeneChrStartEndStrand
AfisC5G00573chr5110931236110933523+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY75991.14.8e-157Scarecrow-like protein 32
SwissprotQ9SN22.12.8e-122GRAS family protein 18
trEMBLA0A199VGJ33.4e-157Scarecrow-like protein 32

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G49950.156.591e-128 456GRAS family transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag263828.t1
Allium fistulosumAfisC5G00573
Allium sativumAsa6G06579.1
Arabidopsis thalianaAT3G49950.1
Oryza sativaLOC_Os07g40020.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03514.11GRASFamily45412290.41.7e-86

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0044699Psingle-organism process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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